FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003651173

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003651173
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31
Sequences flagged as poor quality0
Sequence length146
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGATGGTAGCTTCGCCCCATTGGCTCCTCAGCCAAGCACATACACCAAAT39.67741935483871No Hit
AAATTTTTCCGTGTAGAGGTTACAGCCTTTTATGCTGTTGAGCTCCCAGG26.451612903225806No Hit
GCGCGGGAGGGCGCGTGCCCCGCCGCGCGCCGGGACCGGGGTCCGGTGCG26.451612903225806No Hit
TACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTCACG26.451612903225806No Hit
CGCGCTGGGAACGCCAGCGAGGCAGCGCCACCGGCTTGAGGAGGGTGAAA26.451612903225806No Hit
CCAGAAGGTCATGTAGATTTATGAACGTGCATAGGGTTCCTCAGTCTCCT26.451612903225806No Hit
TCCTGATGCTGCTGCTGCTGCTGCCGCCGCCGCCGCTTCTGCAGCCCAGC26.451612903225806No Hit
TTCGTACAGGGAGGAATTTGAAGTAGATAGAAACCGACCTGGATTACTCC26.451612903225806No Hit
GCTAACTTTGCTTTTCTATTTCCCATGGGTTACAGGTATTGTGGCATATA26.451612903225806No Hit
ATTAAAACGGCAGCAGAAGTTGGAGCAGCTTGAACTTGAGAAGCAGAAAT13.225806451612903No Hit
TCCCCACCCCGGAGACCGACCCCAAGGTCCTCGAGGAGATCCGCCGCTTC13.225806451612903No Hit
GCATTCACCCGTGTCTGTTCACTGACCAAAGTCCACAATTTGTCAAGGTT13.225806451612903No Hit
ACCTTCCACCGCATCGGTCTGTGGCGCATGGTGGTGACCGGCGCGGCGCT13.225806451612903No Hit
CAATCTGTCAATCCTGTCCGTGTCCGGGCCGGGTGAGGTTTCCCGTGTTG13.225806451612903No Hit
GGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGA13.225806451612903No Hit
ACCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTTGCAAAGCTGAAACTTA13.225806451612903No Hit
TCCTATCATTGTGAAGCAGAATTCACCAAGCGTTGGATTGTTCACCCACT13.225806451612903No Hit
CCGTGAAAGCGGGGCCTCACGATCCTTCTGACCTTTTGGGTTTTAAGCAG13.225806451612903No Hit
ATCTCTGAGTGACTCAACAAAGACAGGACACATGGGGTACAAAGACAAGG13.225806451612903No Hit
AGCCAAGACGGGCTGGAGACAGGACCAGGGGTCAAGAACTGGGAAGAAGA13.225806451612903No Hit
GGTGAGGTTTCCCGTGTTGAGTCAAATTAAGCCGCAGGCTCCACTCCTGG13.225806451612903No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)