FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003651345

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003651345
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13
Sequences flagged as poor quality0
Sequence length146
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGGAATGGAATAATCCATGGACTCGAATGCAATCATCATCGAATGGAAT215.384615384615385No Hit
TGTCCGGGCCGGGTGAGGTTTCCCGTGTTGAGTCAAATTAAGCCGCAGGC215.384615384615385No Hit
CTTGTGGGTTGTCGTCGTCACAATCTGGGCGTGCGGGACAGGGTCCTCGT17.6923076923076925No Hit
GTCTTGATCCGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTCTGCTCAC17.6923076923076925No Hit
TTCCAGATCCTGGAATATGAAAGAACTGTTAAGAGGTTTCCAAACTCCCC17.6923076923076925No Hit
GTCTTGATCCGTCACCCAGGCTGGGGTGCAGTGGCGTGATCTCTGCTCAC17.6923076923076925No Hit
GTATAGTAGTTCGCTTTGACTGGTGAAGTCTTAGCATGTACTGCTCGGAG17.6923076923076925No Hit
TCCTTGTAGATTCTAGACATTAGACTTCTGTCAGATGCATAGTTTGCAAA17.6923076923076925No Hit
TAAATAGTTATATTCGTGAACAGGAAATGAGCTTGGTATTGTAAAGATAA17.6923076923076925No Hit
GTGCTGGCATGTGGGTCTGGGACACAGGGGAATGTAGCTCTAGGCCAGGC17.6923076923076925No Hit
TATCAGATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGG17.6923076923076925No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)