FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003651439

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003651439
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31
Sequences flagged as poor quality0
Sequence length146
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CATCTTCCTAAGAAATCCACTCTGTACCTGAGTTTCCACATGGAACTTAG26.451612903225806No Hit
TAATTATCCAGTAAGTAGGCAGACTCTTATGAATATTCAACAATAATGGC26.451612903225806No Hit
TGATAGTGGAGTGCCATGAATTTAAGATTAAGCAATGCTCTGCACCTGAA26.451612903225806No Hit
CTCTGGTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACC26.451612903225806No Hit
GCCCTGAAAGACCTCGCTTTAATTCTTCCAGCATGAGCCTTTGTTGTAGA26.451612903225806No Hit
CATAATGCATTGTAAAGTTATGCTTGGAAGCAAAGTAACAACAAAAATGC26.451612903225806No Hit
AAAGAGAAAAAGTCAACCAATCCAGGGTACATGCTTTCACCTCCATCCAG26.451612903225806No Hit
CAATATGGCAGGCGGAGGAAGATGGGATAACCTTGCTAGCTGAATCTTCT26.451612903225806No Hit
GCGCTCGCGACGCCCTCGCCTGCGCCGATGCCTGTCGACCCGTGGGAAGC13.225806451612903No Hit
CAAATAGGATGCACAACCCATAGCCAGGACACCTGCGAACACACCGATGC13.225806451612903No Hit
ATAATAGTCTCAAATTACATAAGGCAAAAACTGATAGAATGAAAGGAAGA13.225806451612903No Hit
TTTATCTGTATGCTCACTTGATCTCAGCATATTGGAATTAATTATTTTCT13.225806451612903No Hit
TAGCTACACTAATTTCAAACAAAGCAGCTTGAAAAAGCATTACTGGAGAT13.225806451612903No Hit
AAAGAGAAAAAGTCAACCAATCCAGGGTACATGATTTCACCTCCAACCAG13.225806451612903No Hit
ATGGAATCAACACGAGTGGAATGGAATGGAATGGAAAGGAATGGAATGGT13.225806451612903No Hit
TAGTAATGCAGCTAACCAAGGAGGTGAAAGATCTCTTTAAGACACTGCTG13.225806451612903No Hit
GTTACAGAGAGCCAAATCATGAGTGAACTCCCATTCACAATTGCTTCAAA13.225806451612903No Hit
CATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGG13.225806451612903No Hit
CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA13.225806451612903No Hit
CCTATAATCCCAGCTACTCGGGAGGCAGAGACAGGAGAATCGCTTGAACC13.225806451612903No Hit
TTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGC13.225806451612903No Hit
GTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGT13.225806451612903No Hit
ATCGAACCATTGTACTCCAGCCTGGGCAATGGAGCGAGACTCCATCTCAA13.225806451612903No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)