FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003651440

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003651440
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31
Sequences flagged as poor quality0
Sequence length146
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCATTATAAACTACTTGTCAGTCGACAAGTCTCATCAAAGTGATTAAAT26.451612903225806No Hit
GGAAGGCCCTGAGCACCGTGGCCACGGTGTGGCGGAACTTCAAGCCGCTT26.451612903225806No Hit
GCGCCAGCTATCCTGAGGGAAACTTCGGAGGGAACCAGCTACTAGATGGT26.451612903225806No Hit
GGTAAGCCTAGAAGCAGAGGAAAGGGCAATGGAGAAAAAATAAACAAAAT26.451612903225806No Hit
GACCATTGGTCTGGCAAGGAAAAGTGCGGGATCGAAAAATCAAATGGCAT26.451612903225806No Hit
CTTTGGGAGGCCAAGGCGGGCGGATCACGAGGTCAGGAAATCGAGACCAT26.451612903225806No Hit
ATCTAGTACCTGATACTAGCTCTGGGTCTTGTTTCACCATCTCTCCCATG26.451612903225806No Hit
ATATAGCAAAGTCCAAATACAATAGCAGAAATTTTGTTTGTTTTACTTGA26.451612903225806No Hit
CTTGAAAAGAATGTGCATTTTGCTATTGCTGAGTGAAATGTTCTAAAAAT13.225806451612903No Hit
TCTTCTCTAGTGGCGGCTTTCTTTTCAAGACCAACTTTTACTGTGAAACG13.225806451612903No Hit
TTGCAACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCCGGAAGCT13.225806451612903No Hit
ATATAGCAAAGTCCAAATACAAAAGCAGAAATTTTGTTTGTTTTACTTGA13.225806451612903No Hit
GAATAACTGTCACAGCCAACTAACTCTTCCTGCTGCTTACCTCATCCCCT13.225806451612903No Hit
GGCACTTGCCGGCCACGACGCAGTGTTCATCGCAGCGCACTTCGCCACCG13.225806451612903No Hit
CCATTCGCAGTTTCACTGTACCGGCCGTGCGTACTTAGACATGCATGGCT13.225806451612903No Hit
GGGAACACTGCAACTGATAGGAGAGGGATGGAAAAATCCCTGAACTTAAA13.225806451612903No Hit
GTGTTCCATTGGTCTATGTGTCTCTTTTTGTATCAGTACCATGCTGTTTT13.225806451612903No Hit
CCTTTCCATTCCATTCCATTCCATTCCATTCGATTGCAATCGAGTTTATT13.225806451612903No Hit
CGGGGAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA13.225806451612903No Hit
CAATCAATATCATGAAAATGGTCATACTGCCCAAGGTAATTTATAGATTC13.225806451612903No Hit
GGTCTGCCGGTAGCGGTTGACGCTGGCGCCGAGGTTGCTGCCGCCGATGC13.225806451612903No Hit
GGCCTCTGTAGGCAGGTTCTGGCCCTGACGAGCTGTGTGACCCTGGCTGC13.225806451612903No Hit
ACCCAACACGGGAAACCTCACCCGGCCCGGACACGGACAGGATTGACAGA13.225806451612903No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)