FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003651441

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003651441
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length146
%GC56

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTCACGGAGAAGCGAATGGACAAAGTCGGCAAGTACCCCAAGGAGCTGC312.0No Hit
GCCCGAGGAAGTGCTCGAGATGGAAACCCGCCTCTCCGGCGGCGACGTGA312.0No Hit
CACCGTCCACACGAAGTCGACCTGTGGTGTCTTTAGCGGCGCGAACGTGT312.0No Hit
GTGCGTGCCTGTAATCCTGGCTACTCAGGAGGCTGAGGCAGGAGAATTGC28.0No Hit
ATAATATTATTTATATGAGAAATCCATTTTTTAAAAATCTGATCATTTCA28.0No Hit
GGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAG28.0No Hit
ATGGTGCGATCGTCTTCACCATGTCAAACATCCACTCTGCGGCGGTCAGG14.0No Hit
ACCCAGCATTGCTGCTCCTACCAACAGGTTAGGGTTTCGATGAGCCAAAG14.0No Hit
CATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGG14.0No Hit
CACGCATCCCGTGGCGGCGACGACCCATTCGAACGTCTGCCCTATCAACT14.0No Hit
GGTCGATGGCGCGTGCAAAATTAGGAAGGGGATCTGACATGAGCTTTCTC14.0No Hit
ATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAA14.0No Hit
CACTAATAGGGAACGTGAGCTGGGTTAGACCGTCGTGAGACAGGTTAGTT14.0No Hit
GTATGGAGAAACACCAGGGTTATCGAGGAGACCCGTGAGGCGCTTCTCAA14.0No Hit
ATCGAAAGGGAGTCGGGTTCAGATCCCCGAATCCGGAGTGGCGGAGATGG14.0No Hit
GTCCCAAGGACTAAAAAGGCACCAACGCACATCTGTGTGACGACGGTGAA14.0No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)