FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003651442

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003651442
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25
Sequences flagged as poor quality0
Sequence length146
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCTGACAGCCAGAATCTCCCACGTGGTGATGGAGTCTTTCAAAAATATA312.0No Hit
GTCCAGCGCTTCGAGCGCTGTCGCGATGCCGTCGCTCGACAGGCGGTCGC312.0No Hit
AGGAGACTTTGCGGGTAAATGAGATAACATCTGTTCCAAATATTCGGAAG312.0No Hit
GATCATTTGAACCCAGGAGTTTCGGCTGCCCTGAGCTATGATTGCACCAC28.0No Hit
GTATCACTAAGTTAATTGTCTAAAAGGTAACTGATTTCATCAAACCTTCC28.0No Hit
TCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGTGGCTGAACGC28.0No Hit
TTGCAACCATACTCCCCCCGGAACCCAAAGACTTTGGTTTCCCGGAAGCT14.0No Hit
CTTTTTAACTGCAGCAACTTTAATATACGCTATTGGAGCTGGAATTACCG14.0No Hit
CTGCCTGATCCTTCGGTAACCAAACCGCACCTAGTGATCACTGCGCATCG14.0No Hit
CTGCTTGAGGCTTATTCGGGCGCAGATCTGACCAAGCGACAGTTTAAAGT14.0No Hit
GTGTCGAACTGCGTCGAGCCCGTATCGTTGAGCGGCTGCACCAGTCTGGC14.0No Hit
GCGCGTAATGGTCACGCCGGAGATGCGATTGAACGATTCGGCGATGTTGG14.0No Hit
GCGTTCAGTCATAATCCCACAGATGGTAGCTTCGCCCCATTGGCTCCTCA14.0No Hit
CTTGTGCAGCTTTGGCTCATCGAAACCCTAACCTGTTGGTAGGAGCAGCA14.0No Hit
GATTTACACCCTCTCCCCCGGATTTTCAAGGGCCAGCGAGAGCTCACCGG14.0No Hit
CACGATCCTTCTGACCTTTTGGGTTTTAAGCAGGAGGTGTCAGAAAAGTT14.0No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)