FastQCFastQC Report
Tue 10 May 2022
EGAF00003651569

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003651569
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences446247
Sequences flagged as poor quality0
Sequence length146
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA4870.10913238632416576No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA4670.10465056347717742No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT4650.10420238119247861No Hit
GTTGTAGGTGGTTTCATGGATGCCAGCAGACTCCATCCCGATGAAGGATG4570.10240965205368327No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC4510.10106510519958677No Hit
GGTACATAGTGGTGCCCCCTGATAGGACATTGTTAGCATAGAGGTCCTTC4490.10061692291488794No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)