FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003651605

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003651605
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length146
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTGCATCTCGCCCCTCTGCCTGGCCCAGCTTAGACGTAGGCACTGCGG27.6923076923076925No Hit
ATCCTGGGTGCTGCAGATACTGCAGTGAAGTAAAACAGGAATCAATCTTG27.6923076923076925No Hit
CGTGTGGGATGAAGGCTGTGCCGTCGTTCACCTGCCAGAGTCCCCAAAGC27.6923076923076925No Hit
GTCTTGGCTCACTGCAACCTCTGTTACCCGGGTCCAAGCAATCTCGTGCC27.6923076923076925No Hit
CTCACACAGTCGGCGCTGCCGGTGAGCGCGAAGCGCGCCGTCGCGCTCGG27.6923076923076925No Hit
TACAACAAGAAGGTGGCTGTCTGCAAATGAGATAGGAGGCTCTCGCCAGT27.6923076923076925No Hit
GGCTTGGTGGTACATACCTGTGTTCCCGGCTACTCCAGAAGCTGAGGTGG27.6923076923076925No Hit
GTTCTTCTCAGCACCACGTCACACTTATTCTAAAATTGACCACATAATTG13.8461538461538463No Hit
TCTTGGAGGTGTTGCGCGGCTTCGACGCGAAGGAAGCCCTCTCGGCGCCG13.8461538461538463No Hit
CTACAAAAATAAAAAAAAATTAGCCAGGTGTTGTGGTGCATGACTATGGT13.8461538461538463No Hit
GGGTGAGAGAGCGAGACTCCATCTCTAAAGGAATGAATGAATGTGATTAT13.8461538461538463No Hit
GAAGACCCCAACCGGCTGGCGACCTTCAGCGTCGATGTCGCTGGCCTGCA13.8461538461538463No Hit
ATGGAATTGTCATCAAATGGAATTCAAAGGAATCATCATCAAATGGAACC13.8461538461538463No Hit
CAGCTGTCCTTGTAAGAGACAGAAGAGGAGACACAGACACAGAGGAGAAG13.8461538461538463No Hit
GTACAGCATTTCGCCGGCGGCGTTCTTCGTCGCTAGGACGCGCAGCTTGA13.8461538461538463No Hit
GTCGTCTACCAGCTCGATAATTGGCGCAAGTTGTAGGTCGGGGGCACCAC13.8461538461538463No Hit
ATTGACAATAGTTTGCAAGTTTATTTCAATGAGGTGGACTTCGAGTTTGC13.8461538461538463No Hit
TCATAGGCTATGTCCTCCCGTGAGGCCAAATATCATTCTGAGGGGCCACA13.8461538461538463No Hit
GTGCATTACATTTGGAAAAAAATGTGAATCAGTCACTACTGGAACTGCAC13.8461538461538463No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)