FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003651606

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003651606
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length146
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCGCAGCGGCTTGATTGCTTCGTCCCGTTCGCGCGCCGCCTTCTTCTTC27.6923076923076925No Hit
GTGTAAGCCACTACTACTTGTATTTCTCACATCAAAATCCGTGTTATACT27.6923076923076925No Hit
ATGTTATTATGCCTCAAAGGCCAACTGTGTACAAGGTACTCTTCAGCCTT27.6923076923076925No Hit
GATCTTAGGTGTTGTATGCCAGGAAACGGGAATGAAGACCAAACACGTAT27.6923076923076925No Hit
TTCCCATCCACGGCTCGCACGCATGAGGAACAGGCAATGGACGCTACCCC27.6923076923076925No Hit
GCCCTCTTTTCATTACAACGGCATTTTCCAATGTGTGTTCTCTGGAACTG27.6923076923076925No Hit
GTGGTGGTGGTGGTCCTCATCGTCGTGGTGATTGTGGGAGCCCTGCTCAT27.6923076923076925No Hit
GTGCCCGTGTGGGCGTATTTTCGCAAGCTCCAGAAAGGCGAGGTGCGTGT13.8461538461538463No Hit
ACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTCAGCCACCGCGCCCG13.8461538461538463No Hit
ACATAGACCCGTGAAGATTATTACAATTCCAGGTGAGATTTGGGTGGGGA13.8461538461538463No Hit
ATATGATGATGATTGCATTCGAGTCCGTGTATTATTCCATTCCATTCCAT13.8461538461538463No Hit
GTTTGATCCCGTTTCGTGCAAGAATAGGAGGTGGAGTGCTGCTAGGGCTG13.8461538461538463No Hit
TTTTGAATGTTAATAGACACATTTCCTGGCTTTGCCATGGTAAATAGATA13.8461538461538463No Hit
TGCACTGCCTTGGTGACCAGGGAAGTCACCCCACGGCTATGGGGAAATTA13.8461538461538463No Hit
GTGTTGATCACGTCACCCGCGAACAGCGCCTCGCGCTTGCCCGCCAGATC13.8461538461538463No Hit
GTGTCCAGTCATGACCTCGATCCATCGCGTATAGGGACGCCCCCTGCTCG13.8461538461538463No Hit
GTGTCCTAGAGATTCTGGTACATGGTGTCTTTGTTCTCATTGGTTTCAAA13.8461538461538463No Hit
TGTCAGGGGTGTCGGGCGTGCGGGTTTTCTCGGGCTTGACGGACGGCGCC13.8461538461538463No Hit
TCATAGCTCACTGTAGCCTCGACTTCCTGGGCTCAAGCGATCCTCCCACC13.8461538461538463No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)