FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003651607

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003651607
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences33
Sequences flagged as poor quality0
Sequence length146
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCCGCAGGCTGACAAAGCGCGCCTCCAGGTAGAACGCGCGGTCGTCCCA26.0606060606060606No Hit
GTCACGGATAGTCTCGAAGCCGCCAAGCAGCATAACTAGACGATCCAAAC26.0606060606060606No Hit
GAGCACCTGGGCTCTGTGGGGTCAGGAGCCCTCCCTGGCTGGGGCGATGG26.0606060606060606No Hit
AAGCTATACTAACCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTC26.0606060606060606No Hit
GGTCTCGCTCTGTCACCCAGGCTGAAGTGCAGTGGCACAATCATGGCTCA13.0303030303030303No Hit
GCCTGGGTCTGTGTCTCTTTTCTCTTTCTCCTTAGTCTTCTCATAGCATT13.0303030303030303No Hit
TGCTTGTGGACTGGTTTGGTGATCCACTGGGTGTCAGGATTTCTTCTGAT13.0303030303030303No Hit
AAAGAAGGCTATGCAGACAAAAACCTGATTGCAAAATGGAAAAAGCAAGG13.0303030303030303No Hit
CCTTACAAGAGCTCCTGAAGGAAGCACTAAACATGGAAAAGAACAACTAC13.0303030303030303No Hit
CTCCTCTGCCAGAGGGGGCTGAGAAAAATCCCAAGTTTGGTATTTTTTTC13.0303030303030303No Hit
ACAGGAATCTCTTCCTGAGCGCTGGGACTGACGGGCATGTCCACCTGTAC13.0303030303030303No Hit
GGTACCAATCCTATTCCAAAAGATAGAGAAAGAGGGAGTCCTCCCTAAAT13.0303030303030303No Hit
AGACCATCCTGGCCAACATGGAGAAACCCTGTCTCTACTAAAAATACAAA13.0303030303030303No Hit
CACTTTATATCTGTGGTCTTCCTCCCCAAAGCCCCAAATTCAAGTCTAAT13.0303030303030303No Hit
TCCTTGAGCGCCAGCTCCCCACGCTCCTCAGCCTCGGCAATGGCGGCCTC13.0303030303030303No Hit
GACAAAGAATGAAGCGCTTATACAAAAGAGCTTTTTTTCTCTCCTCTTCA13.0303030303030303No Hit
TTAAAGGTCATTATGAAAATGTATATAACAGTGAAAAGATAAGTGAATAA13.0303030303030303No Hit
ATATGGAGGAAAGAATAGCAGGTTTCCATGTTGATGGACTGCTCCAGAAG13.0303030303030303No Hit
ATCGTCGCGGCCGTGAACGAGGGGGTGGGGACGGCCCTACTGATCCTCGC13.0303030303030303No Hit
AGACTAACCTAAGCAGACTCTCTGCTAGTTTATTTTTAACTAAAGCTGTA13.0303030303030303No Hit
CCCCTCGCGGGGACACCGGGGGGGCGCCGGGGGCCTCCCACTTATTCTAC13.0303030303030303No Hit
ACTCTGTTGATAGTTTCTTTTGCTGTGTAGAGCTCTTAAATTTAATTAGA13.0303030303030303No Hit
GGTGACGGTGGCCAGCACGGCGGTGAGCGTCGGCGCCGGCGCGGTCGGGC13.0303030303030303No Hit
GAGAGGTGATCCGATGAGTGCGCAGACGTACGAGTGGTATATCGAGACGG13.0303030303030303No Hit
GCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCCT13.0303030303030303No Hit
CAGCAGCAATGGCAGAACCAAAGGTGGCTTTGACCTCCACGAGGGCTCAG13.0303030303030303No Hit
CTACAAGGCTTGTATCACCCAGATGCCAAAACCAGACAAAGAAACATCAA13.0303030303030303No Hit
TTATTTCCTTGTTTTGCAAATAAAACTGGCTAAGTTGGTTGCTTTTTGGT13.0303030303030303No Hit
GCTCTGGTCCGTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAA13.0303030303030303No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)