FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003651618

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003651618
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4245
Sequences flagged as poor quality0
Sequence length146
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CACACACACACACACACACACACACACACACACACACACACACACACACA150.35335689045936397No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT120.2826855123674912No Hit
TGTCTACACTTAGCCTCTATCCATGGCTACCTGGGCATCGTGGAGCTTTT80.18845700824499412No Hit
ATCTAATTCACCTCCTATTAGGAGCCGATCGTGCTTGTGCGCCGGCAAAA80.18845700824499412No Hit
TGTCACTCCAGGCAAAAAGGCAGCAGCAACACCTGCCAAGAAGACAGTTA60.1413427561837456No Hit
ATCGCGTATAGGGACGCCCCCTGCTCGCGTTACTGCCAAGCGAGCGTGGT60.1413427561837456No Hit
ACACAAATGGGGGTCATTTTTGTCAGTGGCCAGTTTGTGCAGTTCCAGTA50.11778563015312131No Hit
GTATCAACGCAGAGTACATGGGGAATAATTGCAATCCCCGATCCCCATCA50.11778563015312131No Hit
CCCCTGAAGATCCCAGGTGGGCGAGGGAATAGTCAGAGGGATCACAATCT50.11778563015312131No Hit
GTAATGGCCGGACTGCCCTTCACCTCGCAGTGGACCTGCAAAATCCTGAC50.11778563015312131No Hit
GTCCTGCACCACCCCGCACCTCCACTCCATCCTGAAGGCTACCAACTACA50.11778563015312131No Hit
TCATAGGGCAGCTCGTCCTCTGTGAACTCCGTGAACTCTGACTCTGTGTC50.11778563015312131No Hit
GGAGTGGGCCATGGAGGGCCCCCGCGACGGGCTGAAGAAGGAGCGGCTAC50.11778563015312131No Hit
ATACAAGTCCATGTTCTTTCAGCCCCTTTGCACTCATAACGTCAGACGCT50.11778563015312131No Hit
GTATCAACGCAGAGTACATGGGTACCTGGTTGATCCTGCCAGTAGCATAT50.11778563015312131No Hit
ATTCTCCCCAGACGCCGAGGATGGCCGTCATGGCGCCCCGAACCCTCGTC50.11778563015312131No Hit
GTGATACACGTTTCTGGAAACTGCCTCGTCATGCGACTGTTCCCCGGGGT50.11778563015312131No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)