FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003652340

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003652340
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14
Sequences flagged as poor quality0
Sequence length146
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGCTATCGCGATCAGATCCGCGGGTTCTGGCGGGGCGATCCGGGCCTGA214.285714285714285No Hit
CTAAATATGCAGGCCGCTCCTCCGCTTTTCCTGCCTTGCTCACCGCCCCC214.285714285714285No Hit
GAGGTACGGCGGTCGAACGAGCGGGCAAAACGCCTGTACCGACAGTTTGG17.142857142857142No Hit
ACCGTCATGGGTCCGTTGCACACCGAGCAGGTCGTGACCTTGCGTTTCTG17.142857142857142No Hit
ATGGTGTCCCCACCAATATCAATAGTGACCAGGGCTTGCACTTTACCAGA17.142857142857142No Hit
ATCACAAAGTGGTAAGCGCCCTCCCGAAGGTTAAGCTACCTACTTCTTTT17.142857142857142No Hit
GGCTGCTTCAGTCTCGCCAGATCTTCAGGCTCTGTCTCTGATTCTAGTGC17.142857142857142No Hit
ACCTGGGTGTAAGCTTCGGTCCGTGGTTGGCGCAAAGGCCGCCAACATGA17.142857142857142No Hit
ATATAATCGGTCGTGCGTCCCTCGGGCAGGCTGGGCATTAGGGCCTGTCT17.142857142857142No Hit
ACCTGGGTGTAAGCTTCGGTCCGTGGTTGGCGCATAGGCCGCCAACATGA17.142857142857142No Hit
CCTTTCCATTCCATTCCATTCCATTCCATTCCGTTCTATTCGGGTTAATT17.142857142857142No Hit
GTGCTCAGTAATGCAAGATGTTTTTCCAGAGGAGTCCCCCACCAACAATT17.142857142857142No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)