FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003652626

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003652626
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31
Sequences flagged as poor quality0
Sequence length100
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCCGGCGTGCTCGCGCTGCCCAAGCTGCCGGTGGCGCAGTACCCGAACA26.451612903225806No Hit
GCTTAACTGATGGCTTCCCACTAAGCCTAACCATTATCACTAAGCATATG26.451612903225806No Hit
GTAATTGACCATCCCGACTTCAATCGCCTGCCGCGCGCTGCTGGCATAGC13.225806451612903No Hit
TCGCCATGTTGTAAATCATAGTGGCCCCCTTGGAAAAACAAAGGGCGGAA13.225806451612903No Hit
ACGGCTATCATAGAAAAAGAAAATCTAGGTGGTATTTGTTTAAACTGGGG13.225806451612903No Hit
GGGCATGACGGCGTTCGTCCTGGAGATGGCCTTTGGCGGCGTGGCGCTCG13.225806451612903No Hit
GTAGCCGGCTCACCGACGCTCTCGCCGCGAGAAGCCTACTTCAACAATGA13.225806451612903No Hit
GGTGGACGCCCTGCAAGAAGAGGTTCTGAGCCACGGTGTTCTGCACGCCG13.225806451612903No Hit
GATCAAGGCAGCCAGCTTGGCACGGGCGCGGCCAATGCGCCCCTCAATGG13.225806451612903No Hit
GATGGAAATCACCGAAGACGGTTACGCCATTCTGCAATTTGGCGGCGGCT13.225806451612903No Hit
GAACCCGAATTCTTCGTGTTCGACGGCGTGACCTGGAACACCGACATGTC13.225806451612903No Hit
GATCTCATTACCCTGCACCTGCGCGAAGATCGCCGCCACATCAAGGACGC13.225806451612903No Hit
ACCCTCGAGCGAACGCGCCGCGCGCATGCAGAAGCGCCTGGACGCCGCCG13.225806451612903No Hit
CCCCTTCACAAGCGTGCAGCTCTGACCTCCTGCTCCACCAGCTGGCTACT13.225806451612903No Hit
CAGCTAGGCAGGGCCAGTAGGCTGCCGGCAGCGGCACAAAGCCGAACAAT13.225806451612903No Hit
ATCGATGCGTGGTCAACGTGGGAGCCCTACACGGCGATGGCCGAAACGGC13.225806451612903No Hit
CTGTATTACTTCGCGGTGGTGCCGTACGAGAACGCGTCGAACAGGGTCAC13.225806451612903No Hit
GGCAGGGCGGCTCGAAGCCACAGGGTCCACAGCTCTCCATCGATCCCTGT13.225806451612903No Hit
GTTCCAGTTGTCCTGGAGATAGTCGGCTTTCGCTCCATGCGGAACGCTTG13.225806451612903No Hit
GTTCGGCGAGATGCAAACTGCCTTTGCCGCGCTCGACGCCTATGAGGCAG13.225806451612903No Hit
AACGTGGCCAACGGTTTGCTACGAGACTTAACCAACTCGGACATCTCCGC13.225806451612903No Hit
CATGAAGACAGGTCGACACGCCGGCAGCCGCGCGCCCGGCGGTCGCGCCC13.225806451612903No Hit
GGCGAGTGCCTCACTGGCATTTGCGTAGAAGGAGACGTTTTCCCGCAAAG13.225806451612903No Hit
GGACTTCCGCGTGGAGCGGATGCACCGAAGCGCCGATGATTTCACCAAGT13.225806451612903No Hit
GTTGTGATTTATACTTCAGTTTCATCAGCTTTTCTTCACTTAAATCATAG13.225806451612903No Hit
GCACGATCACGACCGAGCCGGGATGCTCGATCAGCTCGCGCTGTGCCTGT13.225806451612903No Hit
GGTTCAGGTCGAACAGCATGGCGACGAATTCTTCGCCGCCCACACGCGCG13.225806451612903No Hit
GTTTCCTTCCCCCACCCCCTTTTCTCCTTTCTTTCTTTTTATTTCTCTTT13.225806451612903No Hit
ATTTCCATCAGCGAAACGCGACCACCGTGACCAGCAAGCTGTGGGTTGAT13.225806451612903No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)