FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003652663

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003652663
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54
Sequences flagged as poor quality0
Sequence length100
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTACAACAAGGATGCGTCCAAGGAGCCGGGCGTCGCCGAGATCATCATCG35.555555555555555No Hit
CCTATATCCACGCCTTTCCTTATTCCCCACGCCCGGGAACACCCGCTGCC35.555555555555555No Hit
GAGCCACAAGAACAGCCGCAAGAATGCCGAGAACCAGGGCAGCGCATCGG23.7037037037037033No Hit
CGCCAGCACTGGCCAGCTCGGAGGTGGCACAGGAGATTCCGGCGGCACCG23.7037037037037033No Hit
GTGCACACCCTGTGGTGAAAGTTATCCACAGTGTTGACAACTCTGTGGGT23.7037037037037033No Hit
ATCGCGTACAGCAGCCAGCGCCCGTTGCCGGCGTCGGGGAGTTTGCTCTC23.7037037037037033No Hit
CCACCACCGCCACCAGGCCGAGGATGCTGCCGAGCAGCCAGAACTCCTCG23.7037037037037033No Hit
CGTGACGAATTCCGGGCTGAAGCAGCCGTCCTCGATATCGCCGTCGGTCT23.7037037037037033No Hit
TCGCTGCTGGTGGTCGTCGGCTGTCAGGACAAGAAGCCGCCGCAGGAGAG11.8518518518518516No Hit
CTATGGAATCTAGTCGAAGAAGGTGGTAAAACCAAACCAAAAGAAATCAG11.8518518518518516No Hit
AGTTTGGACGGGCATGGGTTACGATCGAGGGCGTAAAGGTGATCGCGGTG11.8518518518518516No Hit
CTTCTGGACTTGATGCTGTCGTTCTCGAGGGGGGTTACTGCTTAGAGGAG11.8518518518518516No Hit
AGATGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTTGACCG11.8518518518518516No Hit
GATAGAGACACAAAACACCCTTCAAAAATCAACGAATCCAAGAGCTGATT11.8518518518518516No Hit
TCTTATACACATCTCCGAGCCCACGAGACCCATTTGACCGTATCGCGTAT11.8518518518518516No Hit
GGCGCGGGCGGGCAGCTTGCCGATTGCGAAGATGGCGGGATTTTCCCAGT11.8518518518518516No Hit
CTGCTGCTGGTGCATTCACTGGCTGCGCTGCAGAGCTTCGTAGTGCTCGG11.8518518518518516No Hit
AAAACCTTTTGCAACAAGTCGAGCTTTATAGACAGTTATATTACCATCAG11.8518518518518516No Hit
ATGCTGCATTGCCCTGACTCGGTGAATCACGATGGTCCCCAGACTCCTTG11.8518518518518516No Hit
AACAAACAAACCGCAAGGCAATGCTGAAGTCCAGTGGCTGCCAGAAACTA11.8518518518518516No Hit
GCAGACAACATCACGCGTTTTTTATTCCCTGACAGGGTTTACGGTACTCA11.8518518518518516No Hit
CGATGGTCGCGTTGTCAGTACTCCCATATTTGACTCGCGGCTTCGCAAGC11.8518518518518516No Hit
TATCAGTTCAGCATACAGGAAGTTCGCTGCCAGCGGATGGCTTAAAAATG11.8518518518518516No Hit
GTGCCTTCCTGCCCGGCTCGCTGCTCGACACGCGCCCAGTCAAGGACATG11.8518518518518516No Hit
TCATCACACTCATTGTCTGCGGGGTTACCATCGCTCCGCCGAGGCCCTGA11.8518518518518516No Hit
GTGCTCGGCACCATGCACCACCTGTACTTCTCGGGCACCCCGAGCGCGCA11.8518518518518516No Hit
CCATTCAGCCCGCTGTCGCTTGTCGTTTCAGTGGCAACGGGTTAGCTTTA11.8518518518518516No Hit
CTTATACACATCTCCGAGCCCACGAGACCCATTTGACCGTATCGCGTATG11.8518518518518516No Hit
GCCCAGGGCTGCTCAACGTCGGGGGTGCTGACGGCGTTCTCCACTGTGTC11.8518518518518516No Hit
CCTATGGAACAAACAACTTCGCGCAATCCTGCACCAAGCGGGAAATCCGG11.8518518518518516No Hit
CGTTGTGGATGCGTCGTCCAGCGATCACGGTGTCAGGGCGAGCCAGGTAA11.8518518518518516No Hit
CTCGCACACCGGGCGGTAGCCGCGCTGGGCGAGCCCCACCGCGGTGCCCA11.8518518518518516No Hit
GTTGCTGGAGTGCAGCGAGGAATGGCGTGATGCCGACACCGCCGGCGATC11.8518518518518516No Hit
ATTTTACGTTATTTTGAGGCCTTACCCCCCAATAACGCAAATCATTTTGC11.8518518518518516No Hit
TGTTACGGTCGTCCAAGGCTAGGAGGTGAGCGTGATGTCGGTAGTGGTCA11.8518518518518516No Hit
GATTAACCGGCTGTTCTCGCACATCGGCATGCTCAACACCTGGCCACCGT11.8518518518518516No Hit
CCTCGAAGATCTGCTGGTTGAAGGAGGGGTTGGACGGGTTCGCGTACACC11.8518518518518516No Hit
ACCTGCCATTCGCCGGCCTGCGCCGTCGCTTCGTCGAACAGGTTTTGCGC11.8518518518518516No Hit
CAACTCGTCAAAAACCACGGGATACATCTGCCGAATCACCCTTTCAGGCT11.8518518518518516No Hit
GTCCATACGGTCAGGAAGGCCACGATCACCAGGGCGGAGATCCCGTAGAG11.8518518518518516No Hit
TACTGTCACTGTCACTGCCATCCTTACAGGTTGCAGGAGCCCTGCTTCAG11.8518518518518516No Hit
ATCCTCGGCGAGAAGGACCGCAATCCCCATCTGTTCATGGAGTATTTCGG11.8518518518518516No Hit
GTACGATGTTGTATTTCAAGGCATTGCTGGAAGGGTTGTCGCCGCTACCG11.8518518518518516No Hit
CCGTTGTAGCCAGCCTGCAAAAGGGGGTCTGTTGGCCAGCTTCAGTCTAG11.8518518518518516No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)