FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003652664

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003652664
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54
Sequences flagged as poor quality0
Sequence length100
%GC61

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCACCCCACCACGCTCCATCAATACATTTTCTGTCCTGCCGACAAGCGAC35.555555555555555No Hit
GGCCCGATGCCCGCACCCGGCATCAGTAATCGCTGCCCACGCTGCCCGGC35.555555555555555No Hit
GGTCCATCGTGTTCCCCCATCACGTAGTTCCGGTGGCACCGGGGCGACTT23.7037037037037033No Hit
CTTCCCGGCCGTCGTGACCGGCACCCTGATCACCATCATCGGCATCTGTC23.7037037037037033No Hit
GTGCTGCGTCATGAGGACCTACAGTTCGCCAAGGCTTCGGGTGTAGGCAA23.7037037037037033No Hit
ATTGCGGCGTCACCAGCCGCAGGCTCGACCTCGCGCTGTGGAGCCAGTGC23.7037037037037033No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG23.7037037037037033No Hit
GGCCCGGACCCATCGGCGCGCTTTACCGTCAGCGTGTTCAACGACACCTG23.7037037037037033No Hit
GGCTCTGGCGTCCTGCCTCGGCATGCTGTTCGCTGCTGCCGCCGCGGGTC23.7037037037037033No Hit
CTAACGACTAGACTGATTTCTTTTGGTTTGGTTTTACCACCTTCTTCGAC11.8518518518518516No Hit
CTGGTAGCTTCAACAGAATTGAAAATTTTTCTTTAAGTTAGATGGTGGGC11.8518518518518516No Hit
AACTTATCCGGTTCGACGGCTCAGCGGACGGCGGCCCGCGCCGAGCGCCT11.8518518518518516No Hit
CCAGGCAACTGCGCCTGGGCGATGTCGCGCAGCCGCTCGAATGGAACCGC11.8518518518518516No Hit
TTCTAAAACTCCAAGTCCCCGGGCTCAGCGAACCGCATCCGTTTTCGATT11.8518518518518516No Hit
GCACGCGGCGCGTCGAGAGGGCGTCGCAGGTGTCAGCCCCCATAGCCTGA11.8518518518518516No Hit
TCCTTGCTGCCGCAACCGGATCTACCTCCTGAAGTTGACGATGCAATGAC11.8518518518518516No Hit
GACTTTGGTTGACTTGCCCGATGATCGGCAAGCCATTGAGAATAAATGGA11.8518518518518516No Hit
GCATAGAGGTGTTCATAGTATTCTCCGATGGTAGTTTGTATTTCTGTGGG11.8518518518518516No Hit
AGCTCGTGCAGAGCGCTGCAGTCATGGTCCAGATAGTTGGCCATGGGCAG11.8518518518518516No Hit
CGGACGGTCTGATCCGTCGCGAAGTTTTCGCCCAGGTGCCACCCAAGGTC11.8518518518518516No Hit
GCCAGCGCGGGCGTGACGGTCTACCCGACTAGACTCGCCATGCCGGGCCT11.8518518518518516No Hit
GATAAGTTCGCAGGTAGCTTTTCAGAAAATCGACACTACGACGAATTTCC11.8518518518518516No Hit
GGCAACTGCTCCATTTTTAAGCCATCCGCTGGCAGCGAACTTCCTGTATG11.8518518518518516No Hit
CCATGACGCCGAGAGAGGTTCGCTGCATGACCGCAAACCCGTACGCGATC11.8518518518518516No Hit
GTACGCGCATAGTTACTGGGAGACGGCCAAAGGCACCTCTCAGCGCTGCC11.8518518518518516No Hit
GTTCGGCGTCGATCCCGACGGCGGGCTTGCCCCGGCCGGGCTCACGCCGG11.8518518518518516No Hit
GCACAGTGGCGCTGGCCGGCGGCGCGCTGGCGCAGGGCGGGCCGCCGAAG11.8518518518518516No Hit
CTTGACCACGCCGTTGACGAAGGCGCCTTCGCGCAGCGTGCCCAGCAGCT11.8518518518518516No Hit
CCTCATGACGACCTATGACGGCACTCTTGAGGAGGTTGCCGCCCAGGTCC11.8518518518518516No Hit
CAACTGAGTACTCAATACCCGTGATAAACTCCTCTAAGCAGTAACCCCCC11.8518518518518516No Hit
CCTCCAAATCACAGGCCTTAGGAAAAGAGAAGAGAGAGTTGGTGACAGTT11.8518518518518516No Hit
AAGCAGCTTACATCACGGGTGAAACTTTGCATGTGAACGGCGGGATGTAC11.8518518518518516No Hit
GGTCATGCTCATGGGGGAGGACATCGGCTCCCTGGGTGGCGTGTACCGCG11.8518518518518516No Hit
TTTCAATGGATGCCTCGGCCGATCCCTCTATGACATATCGCGGTATGTCC11.8518518518518516No Hit
GAGTACCACGGAGGGACCCGGAACTGGATAACATCCCGTTCGCAGGTGGT11.8518518518518516No Hit
ATTCGACCGTTGTCGCCGTCGCCATCCCCGCCATCACCGCAGCGTTCGAC11.8518518518518516No Hit
TAGTAGGACACGATCGGCAAGTTGATGAGGAATCCGAAGACACCAGCACC11.8518518518518516No Hit
GTTTCCGGGGCTGCTTCGAGCATCCAGAAGTTCTGCAGCGACAACCGCCG11.8518518518518516No Hit
TTGCAGGATCTGCCGCGCGTGCTGGGCTGGGCCTTCATCAACAGCCTGCG11.8518518518518516No Hit
CATCTCTGTCTCTTATACACATCTGACGCTGCCGACGACATACTTGGAAG11.8518518518518516No Hit
GTACTGGAAAAAATGGATATGCGCGAACCACAATGTGTGGACGATGTGTT11.8518518518518516No Hit
CACCGAACCCGCCGCGGTCGCCGAAGCCACCGCCGCCGAAACCCCGATCA11.8518518518518516No Hit
GACCGTCCGTTTCCAGCTCACGCAGCTGCCGGGCCAGGGAGCGTTCGTTC11.8518518518518516No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)