FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003652706

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003652706
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71
Sequences flagged as poor quality0
Sequence length100
%GC61

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGCGCATGCTGCGCGACATGGCAAGCTGGCGCGAAAACCTGCGCGAGCA34.225352112676056No Hit
GCTTATGATATTTCCTTCAAAAAAAAAAAATTGTGGGGAGGAAAGCCACT22.8169014084507045No Hit
CCTCTTCGAGGAGGTGGTGGTCGCCGTGTCCTCCAACCCCGCCAAGACGT22.8169014084507045No Hit
TCTCTCGACGCAGGGAGCACGATGATGTGCTCGCAAGTCCTCACACCGTA22.8169014084507045No Hit
GGCGGCGGCGGCGCACGATCTGCTGGCGCTGGGCGCGCAGGCGGTGCTGC22.8169014084507045No Hit
GTGATCTATTCGATACAAGAGTTATGGGTGTTTTCACACCTATGCCGAGA22.8169014084507045No Hit
CGATGCTCCCGTCGATTGTCTCAACGTCATCCGCAGCCCGGGCGCCAGCG22.8169014084507045No Hit
TGGCCCAGGAGCCGGGCGCGCGCTATATCGGCGGCGGCACGAACCTGCTG22.8169014084507045No Hit
GGCCAGCACATTGAATCCATACAAAAATATTATGTTCCTAGCACACTATT22.8169014084507045No Hit
GCGCCCATGCGCAGGGGCCGACCACGCTCGTCCTGCTGGGCAGCGCGGCG22.8169014084507045No Hit
AGAGCATTGCGCCCAACGCAAACGTTGACGCGCGTGTAACTCACTGTAAT22.8169014084507045No Hit
GGTCTGGGGCCTGTACATGGCCGGGTCGCGACTCGGGCTGTCTCTTATAC11.4084507042253522No Hit
GTTTCCCCGGCGAGGACCTGCCGGGCGTACACGACGCCCTGGACTTCCTG11.4084507042253522No Hit
GATGACTTCGGGACGGGGTATTCCTGTCTGCAACATCTGAAGTGCTGCCC11.4084507042253522No Hit
GTGCACAGGAGGTGGCAGCAGGGTCAGGCGAGTTCCTGTTCCAGGGACAT11.4084507042253522No Hit
CCACTCTACGCCGCAGGCTGGGTCGGTGGCGCCACGCGGCGCTTGATGAA11.4084507042253522No Hit
GTTAATGACTGAGCAAGTCGATCGACATAATGTCCAAGTCGATCGACTTG11.4084507042253522No Hit
GGCTCGCACATCACAACATCATGCCTTTAACAGACCAAGAATCACGACTG11.4084507042253522No Hit
CATATTACAGCGGGTGTCATTGGGGTAACAGCGTGTAAAAGCGGGCAACG11.4084507042253522No Hit
GGTGATGCTGGACAGGCTCTGCTGGGGGCAGCCCCACTGGACCCAGGTGG11.4084507042253522No Hit
GTGCAGGCTCTTGTGCAGCGCCCAGCCCATCAGCGGCTCGAAGGCGTTGA11.4084507042253522No Hit
AGCTGTGGGGGCTTGGGGAAGGGTGTCGTTTCTTTCTAGTAGTCTCATGT11.4084507042253522No Hit
CTCCCAAGTAGCTGGGACTCCAGACGTGTGCCACTACACCTGGCTAATTT11.4084507042253522No Hit
CGGCGAAGGTGCGCAGCACCCGGCCTTCACGCGCGTCGCGCAGGACGATC11.4084507042253522No Hit
GTAGACGAGTTCGCTGCCGCCGTCGGTTGTCCGGCTGATGCGCACGCGGC11.4084507042253522No Hit
GCGTCGAAGCGGGGACGGTGCGCCGCAGTCGGGCGTCCACCCAGGATCGC11.4084507042253522No Hit
GGCCGGGTGATGCCGTTGGTGATCGCGCATTTTCTGCTCGACGCGGTGGC11.4084507042253522No Hit
ACGGCGAACTCGTCGCCGCCGAGGCGCGCCATGGTCTGGGTGCCGTCGAG11.4084507042253522No Hit
TCCAGAACCCGGTTCGAAAGGGCGGCCAGGAAATGACGGTCATGCGAAAC11.4084507042253522No Hit
GGCGATGGTCTGCAGGCCCGAGGAGCAGAAACGGTTGATGGTCATGCCCG11.4084507042253522No Hit
GTTGAGCCCCGCCTGGAAGACGATGTTGTGCCCGGCCAGATGCTTCTTGG11.4084507042253522No Hit
CCGTCGCAAATTGTCGCGGCGATTAAATCTCGCGCCGATCAACTGGGTGC11.4084507042253522No Hit
CCTGGGTGATGCCCCCGCACGCAACTGGCGGGCACCCCGCGAGCCACAAT11.4084507042253522No Hit
CGCACGCGCTGGCCCGGCTGGGCGAGTCGGCCGCGGCGCGTGACCTGCTC11.4084507042253522No Hit
ATTGGCGACCCAGGCGCAGCCGGGTCGTGCCACGGTCTGTCTCTTATACA11.4084507042253522No Hit
AATGCGAACTGCCAACGGAAGCGCCGGATTGCGCAAGACCCGCGATGCTG11.4084507042253522No Hit
CCCATGGCGTGCTCGCGAACACCGAAGTGGATGGTACGCCCGTACGGACT11.4084507042253522No Hit
CCGCCGGGAAACCGTCTGCGCGTTGCTCTGACCGGTCTGACCATGGCTGA11.4084507042253522No Hit
CAACATGATTGTGCGAATGCCGGTAATGCGACGCAACAGCACGTAACAGA11.4084507042253522No Hit
GCTGAGCGACATGGGCAATCTCTCCCGCGGAGGCCTTGGCCTCGACCAGC11.4084507042253522No Hit
GTTCAAGATCAAGCACGAGCTTGAGGGGCAGTGAGCGCTAAGCGGCACCC11.4084507042253522No Hit
ACGACGCGCCGCGCGAGCAGCGTCTCGACCAGCGCCAGGATCGCCGCCCC11.4084507042253522No Hit
GGTCTTGTAGTAGCGCGTGGGCGCACGGAAGATGTGGCGCGACAGCGGCA11.4084507042253522No Hit
TCCTTGGCTACTGGCTTGGTAGGGGCCTTACCCGTGGGGATGTTTTGCTA11.4084507042253522No Hit
GCATGGCGCTGGCCCGACTGTGCGGCGGCGTCTTGTTGCGCACACCAATA11.4084507042253522No Hit
AACCAATGCAGCGGGTCTCCCCGGCGGGTCCCTGCGACGCACAGAGCGTC11.4084507042253522No Hit
GCCAAATGCGAAGAATTCGGCGGATTTCCTTGACTAACAAGGTGTTAAAT11.4084507042253522No Hit
GTGCTGATCAGGGTGACTCCGCACAGGCAAGCGCGTTCGACGCTTCTTCT11.4084507042253522No Hit
GTCGAGAGCGGCGACGACACCAACAGCCGATGCGCTTGCAATTCATGTGG11.4084507042253522No Hit
AACCCGATCCGAGCGGGATACCGCCGCCGCGTTCCCAGATGCGCAAGCGA11.4084507042253522No Hit
GCTGGTGGTCGACACTTTCGTGAACGGGCCTGAAGACCTGGCGCGAATGC11.4084507042253522No Hit
TGACCGGCCAGCGCCAGCCCGGCATCACCGCCACCGACATCGTGCTGGCG11.4084507042253522No Hit
CATATGCATGCACACACAGGCAAAGACACATTCACATGCACGCAATGGAC11.4084507042253522No Hit
GCGCCTGCTGCGCGCAGCCGACGCCGACAAGCTGGAAGAGACCGTCAACG11.4084507042253522No Hit
GCCTGGGACATGGGGGTTGCAGTGAGCCAAGACTACACCATTGCACTCCA11.4084507042253522No Hit
CTTATGCGGCCATCAGTGCCCAGAGACGCCCCCCGAGGGCCTGTGTTGGG11.4084507042253522No Hit
ATTTATAGTCCTGCATGCAATGCAGAAGTGTTTTTCACTGTTTTTCATCC11.4084507042253522No Hit
GTGCGCGTGCGAGATTCATCGTTGTTGCGTCACAAGAGTATCGAAACGGG11.4084507042253522No Hit
TAACCGTGGAAGTTTATCAAACCAACGGCAAGAAGGCACTTTAAAAGAAA11.4084507042253522No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)