FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003652831

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003652831
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences95
Sequences flagged as poor quality0
Sequence length100
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATGGGAAGCTTGTGACGGAGCCGCTGGTGCTGAAGTCAGGTAGAAGATGT22.1052631578947367No Hit
ATCCGCACCTCCACCCAGGTTATTGACTTCCTCAAGGAAGGCGACCGCAT22.1052631578947367No Hit
GAATACGCAGGATCTTCTTAGCAACGAGGCCGTAGACGGCGCGTGTAGCC22.1052631578947367No Hit
GGTATTGAGTCGGCGCCGGATATCGACCAGGCGCTGGTGGTCACGCTTAA22.1052631578947367No Hit
GCCCGCACCGAGCGCTGCAGCCACCTTGCGAATGGCTTGGTTGTACGGGA22.1052631578947367No Hit
CCCACCTCCTGCGCGGCCAGCGCATACACGGCAAACGAGTGCTGCGCATA22.1052631578947367No Hit
GTGCTGTATTTCGAGGGCGATACGCATTCCGCCTACCGGCTGGTGCGGGC22.1052631578947367No Hit
CCGTTGATGAAGTCGGACTGATCCGACGCCAACAGCAGAATCAGCCCATC22.1052631578947367No Hit
TCGTAGAGCCGCAGTTCGGTGACTCGTTGCGGCGAGGTGTCGTGAGCAAG22.1052631578947367No Hit
GCTTTAGGTCAGGATGGAAGCAAGGCTTGAGGACACAACTGTGGGCTAGA11.0526315789473684No Hit
GCTCTACGCCGTCCAGCGCTTCTCCGCCTCCGATGCCGCCGGTGGTTTCG11.0526315789473684No Hit
TCCCACAACAATGTGACGGGATCAGAAACACCCAAGGGTCGCATGTGCCA11.0526315789473684No Hit
GGCTTGCCGAGACGCTTACGGCGTTGATCGGAGTCCACCACGGTGAGTCG11.0526315789473684No Hit
GAACAACCGTCGCACATTTGGTGAAATCCTCGATCAAGAATGGCGTCGAG11.0526315789473684No Hit
CGGCCAATGCGGCCAAAACCGTTGATACCAACCTTGACGGTCATTAAGGG11.0526315789473684No Hit
TCGTTGACCCGGGTACTGGCAGGTATTCGGACTTCAGGGCCCTCCGTCGT11.0526315789473684No Hit
CGCCATGTATTGCGCCTCGGCCCAGGCCTTGAGGCGCCCAAATTTCGTCC11.0526315789473684No Hit
TCGTAGAGCCGCAGATCGGTGACTCGTTGCGGCGAGGTGTCGTGAGCAAG11.0526315789473684No Hit
GGCAATGACCAGCCAGATTTCGAGCGCGCTCATGCATCGTCCTCGTCAAT11.0526315789473684No Hit
CCTGTGGCCGGTCCGGTGCCGGGTTGGCGTCAGGCCATGACCCAGGCCCT11.0526315789473684No Hit
GACGGACGGAAAACTAGCATTCACAACCCGCAACATCGTCGCCATTGGCG11.0526315789473684No Hit
CACAACAACACGGCTGCCGGCAGCGCCACCAGTCCGATCACCTCGATCCA11.0526315789473684No Hit
GTGTTTTGGAGCAGCGACGCATGCGTCATCGCCGGGCTCGGCGCCGTCAG11.0526315789473684No Hit
GCTTCTTTTTCTTTTTTAGCTTTCTCATCAACCTTTTCTTGAATCTTGTT11.0526315789473684No Hit
TTACTATTAAAAAATTTTTATATAGTTGTAAAAACATACATACTGTTCCT11.0526315789473684No Hit
GGATGTTGACGCCGCGCATCAGCTTATCGCTAATGGCGTTAAAGCCTGTC11.0526315789473684No Hit
GCCGACGTCCTGGTATGCACGACGATCGTTGAGTCGGGTATCGACATTTC11.0526315789473684No Hit
ACTCAAGGGGATGGTTTCCGGCGAAAGCCGGAGATCAGGCGCGTGCGGGA11.0526315789473684No Hit
TGCCGTCAACGCGTCGATGACGCTCCAGCGCCCGCTGCTCATCAAGGGCG11.0526315789473684No Hit
CAGCCAGAACGCCCAGGATGCGCGCGAGCGGGCCGAGCGCGTGGCGGCGA11.0526315789473684No Hit
ATTCCCGGCCGGTGGTCATCAACTACGGAGGCAGCACCGGCATCGTGGTG11.0526315789473684No Hit
CGTCAAGGCGATGATGAAGTTCAACGAGGACCTGCAGAAAGCCGGCGTGC11.0526315789473684No Hit
CCTCGGCGATGGCGGTCTTGCCGACGCCCGGGTCGCCCACCAGCAGGGGG11.0526315789473684No Hit
TCACTGTCCGTTCCTTCAAACAACACCCTATGGAGATCCAAGTACTAGGC11.0526315789473684No Hit
GTCGAATGGTCGAGGTCGAAGTGGCCCGACAAGCACTGCTGGATCTGTGC11.0526315789473684No Hit
GCGAAGCACTGCATTTCTTCGACCCGGCCAGCGGCGAACGCCTGACGACC11.0526315789473684No Hit
AAATAGAGAAGTGCAGACCTGGAAAGCCTTGCGTAAACTGGCAGACGAGA11.0526315789473684No Hit
GCCCTGCACGTTGCCAGTGATTTTGCGAGATTTGTTCCGGTAATTCGAGA11.0526315789473684No Hit
CCTCCCGGGCATTGATCGAAACCTTATAAGGCACGGCTGCCGCGGACATG11.0526315789473684No Hit
GGCAAATGTAGCCTTGGCGATGCGCATTAGTACTTCTCTTTTCTAAATGT11.0526315789473684No Hit
CCCCTAACTCCCGCGTATGTGAAGGAATTGTGGACTGCGATTGAGAAGGC11.0526315789473684No Hit
CCCACGCCGGACGCCGAGGACATCAAGATCCAGTACGGCATCGCCAAGCA11.0526315789473684No Hit
ATCGGCGTCTCGCCGTTGCCGTCCAGGCGCACGCGGCTACCGTCGTGCAC11.0526315789473684No Hit
AAATAGAGGTAGGCCCTTGTGGTTTGCAGGAGGTAACCAAGAAGGGAGAC11.0526315789473684No Hit
CTTCCTGGTGGGCTGGCCGATCATTTTGTTCCTGATTGCCGAACGTCTGC11.0526315789473684No Hit
CCGCAGTGGCATGCAAATATAAAAACTTTGTTTATATTTGCACCGAGTGG11.0526315789473684No Hit
CCTCTAGAGGGAAATAACTGTCCTTTTCTCCGTCAATCACCACGGTGGCG11.0526315789473684No Hit
TAGCTGCTCTGGTAGAGGAGGCTATGACAGCCCCTGAAGGGACTCCTTGG11.0526315789473684No Hit
CCTCGTCAACGTCGTCTCTCGACTTGACCCCTCCCACCAATCTCCCCGAA11.0526315789473684No Hit
GCTTGTCACTGAGCTTGGTGACATCGACGCACGCACGATCTGCACCTTCC11.0526315789473684No Hit
ACATGGCACCTATGCCCATCATAAGAGACAGAGAAAAAGGAGGCCAAACT11.0526315789473684No Hit
ACAGTGGGCTCGCCGCCCTCAAGGACGGCGACGCACGAGTTGGTGGTTCC11.0526315789473684No Hit
TCCCTGAACTTGGGATTGGCTGTCATTTTCTTGTGATTAGACTGAGGTTC11.0526315789473684No Hit
CTCCGGAGTGGGTTCCCTGCCCCGGCCGGGGTGTGGCACTCCCTGCCAGC11.0526315789473684No Hit
CTCCGCGCTGCGTGGTCCCTCCTTAGCCAGACGGGGCGGATACTGATGGA11.0526315789473684No Hit
CTCTGTAACACTGTGGAAAAGCAAAACTGAGGAGACCCCAAAAAGATCAG11.0526315789473684No Hit
GCGATGACACTGGCGTCGATCGCGTCGCGGCGGGCCTGTGCGTCGTTCGC11.0526315789473684No Hit
TTGGTGCGCCGGTGGCGATTACCGGTGCGCTGCTGGTGGGCCTGGGCTTC11.0526315789473684No Hit
GCCAACGCCTATCCGACCCAGCTGCGCGCCACCGCCACCGGCTGGGGCAT11.0526315789473684No Hit
CGGCGCGCATGTGCAGCGCTTCGGCAACGCCATTGCCACCCGCCTGCCCG11.0526315789473684No Hit
GTCTGACACGAATCAGCCTGACGTAGTGGGTATTGGGGAATGCGCAACAC11.0526315789473684No Hit
GCGTCGACCGACGGTGTCCGTACGCGGGCTCAGACGCTCATGAGGCAAGG11.0526315789473684No Hit
GGCATGGCCCAGCGAGCCGGTGCCGGGCGAGGCGAAGCTGTACTTGCCGG11.0526315789473684No Hit
GCCTGTTGCACGCCCTGTCTCAACGGCTTCCCGGAGCGCGCGTTGACAGC11.0526315789473684No Hit
TCAAGGTGCTCCGCACCCGATCACGGCTCTTATTGACAACTGTCTCTTAT11.0526315789473684No Hit
GCGTGGTGCACTGCGCGGCAATACGCTCGTGACACGCCTTGAGCATTTCG11.0526315789473684No Hit
GCCTGGGCTCACGCCGCATGCGCTGCAGCGGCCTTCAGCGGCTGGCTCGC11.0526315789473684No Hit
CTGTGCAAACAGATGGAAGGTTTTGCCGAATACGGCTTCCCCGAAAGCCA11.0526315789473684No Hit
GGTGACCGTGGCGAAGCCGCAGATGGGGCTGCTCGAGCGGCACCGGGTGC11.0526315789473684No Hit
GCGCCACTCATGCGCGCCGATCAAGCCAAGCAGCTCACGCAGCGAGGCGA11.0526315789473684No Hit
CGGGAATCGTAGCCGGTGGCCTGCAGATGCCCCCGCGGATCGATGCAGAT11.0526315789473684No Hit
GCTTGCGGTGCACAACGCCGAAGCCGTTGGAGACGTAAAACTCACCAAAC11.0526315789473684No Hit
CGCTTCGCCTTCAAGATCCTGTCCAAGGTCTTCAACTTCGACTCGAGCGA11.0526315789473684No Hit
TCCACGCCGTGCTTCCAAGCACCTCGACGGTGCGCGGCAGCACGAGGGCG11.0526315789473684No Hit
CGAAAGCGCCTGGCGAGCCTGGCGGATGCGCCCAATACCTGCTCGGCCGA11.0526315789473684No Hit
CGGATAGCATCTCCAAGCGGGTGCGCTACCGCACCAAGAAGGAAGACAAC11.0526315789473684No Hit
ACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAACCCAAAA11.0526315789473684No Hit
GTTGAGCGTCTTCCCGAGGTTCAGTTGAGAATCATCGGAGATGGACCGCA11.0526315789473684No Hit
ATATGACGCAGGCCCCCTCATAGCGAGAGGGCCTCCGCGCTAGGTAGAGC11.0526315789473684No Hit
GACTTAGTGCAAACACAAAAGTCATTATCGACAATACAGACACAATTTCA11.0526315789473684No Hit
ATACCCTGCAGAACATCGCACGCGATGCCGCCCGCGAAGGCAAGACCGTG11.0526315789473684No Hit
GTCTACAACTCGGCCCTGACCGAGTTCGCTGGCATGGGCTTCGAATACGG11.0526315789473684No Hit
GTATCTTCCTTCCACCTCAAAACTGTCATTTTCCCTTCCTCCCTGTTTCA11.0526315789473684No Hit
ATATTTATCTCTGCACTGCTCTTTTCCGCGGTATGGCTGACGCCGCCGGC11.0526315789473684No Hit
CGCTTATTCAACACGCGCCGACTTACACGCGTGAAATTAGGCCCCAACCG11.0526315789473684No Hit
ATCTCGACGAGGTTGGGGAAGGCATCACGGAACAGGCCGGAGATGCGCGG11.0526315789473684No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)