FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003652970

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003652970
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences164
Sequences flagged as poor quality0
Sequence length100
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGTATGGGCTAGCGGCAAGGTGAGGAGTGCAAGGGCCTGGATGAAGATT42.4390243902439024No Hit
CCGCCGCACGGTGGCATCGCCTTCGGTTTGGATCGTCTAGTTATGCTGCT31.8292682926829267No Hit
GAGTCGACGCGGGGGCTCGGACGTTCTTTTGGCTACAACCAAGAAGAGTC31.8292682926829267No Hit
CTCGGATACATTGCCGCCATTACAAGCAGCAGAGCGAATCATCGAGGAGC21.2195121951219512No Hit
GTGATGATCTTTCCTCGATCTCCACCGTGGCTGGCTTGTCCGAGTGTGTT21.2195121951219512No Hit
CGTCAGAACCGCTGATGTCCTCGCCACGGCGACGACGGCGACGACGGCGA21.2195121951219512No Hit
GAGTGACGTGGCTCGCAGGCCACTCAACATATTGCTGAGCGCGACCCCCA21.2195121951219512No Hit
GAGTTGGCCCTTGACCTTTCGGTCGCGGCCGCGCACGTTCTGGGCGAGGC21.2195121951219512No Hit
GGTGATGGTGCCGCGCTCCACGGTGGTTGTCAGGGCATCGACGGCGCACA21.2195121951219512No Hit
CGGTAAACCCCTGGTGAGCCAGTCCCGCCTTAACCATGGTGGCCCCCTGA21.2195121951219512No Hit
GTGACTACTCGACCACCGAGATAACTCAGGCCTACCCGTATTTCTACGGA21.2195121951219512No Hit
GTGGTTTGGCGATCGAAATGATGTATGCGTCGTGGGAGATCCGCACCAGG21.2195121951219512No Hit
TGATATGTCCGGGATGAGTGCTTCGGCCTGGGACTTCCCTGCAGTGACGA10.6097560975609756No Hit
CCTTCTGCCCGCTGCCTAATCTCGGACCGGGGCCGGTGGCCAGGCTCTTG10.6097560975609756No Hit
ACCCTCAGCGACGTCGCCAAAGCATGCGGCGTCTCCTCGCAAACCGTCTC10.6097560975609756No Hit
CGCTCGTCTTTCTCGTCATCGGCGGCATCTCCGTTCTCGTCAGCCTTGGA10.6097560975609756No Hit
CGACCACAGTGACGAGCCCTGCGGCTCCCGGCCCATACGTGCCCTTTCCC10.6097560975609756No Hit
GACGGTGACTACGGCATTATTCGTGAGTACACCGGCCACGGGATCGGTAC10.6097560975609756No Hit
GTATGGCGCTTACTGAAAGGTTTCCGATCGTGAAGAAGCATGTCATTGGG10.6097560975609756No Hit
GGGTTGACGCTAATCTCGGGGTCGATGAAATCCGCGAGCAGCTGCTCTCC10.6097560975609756No Hit
GTTGCCTGCTGCGAGCGGGAACTTGAGCCGCTAGGCGTCTCACTGGGTTG10.6097560975609756No Hit
ATCTTGCCGTGTCGTTCAACAACATGCTGTCCTCGTTGTCGAACTCCCGG10.6097560975609756No Hit
CTGTACGGCTTGCTGCCTTCCGATGAAGGGCAGGTCTACATCGACGGGGT10.6097560975609756No Hit
GCAAGATCCTGGTATCGGTCTGCGATTCCGACTCGTCCAACATCAATACA10.6097560975609756No Hit
CCGCAGGAAGGCAAATCGCTGCCTCTGATGATGCAAGCCGTGGGGCGCAG10.6097560975609756No Hit
ATTTGTGCCTTCCTCATCCATGCACCCCGACTGTGGTTGTTGGACCGCAA10.6097560975609756No Hit
CGCAAAAAGTGTGAGATTTTCCGCTAGCACTAGCTAACGGCCTGTCCGTG10.6097560975609756No Hit
GATCTAGCCGAGTCACCTCGTATTTTTTGCCGGGGTCACCATCGGCGGAT10.6097560975609756No Hit
GTCTAGGATCGGGCCCGAAAGCCGACCTGAATACCGGCGAACCTGTTGCG10.6097560975609756No Hit
GGGATGGCTCACCGAACCCGAATTGTCCACTGGGCATCCCACCCGCGAGG10.6097560975609756No Hit
AGATCGAAGTGTCCCCGACAACTCGGCCAGCGACGGCGACGGCGATCATG10.6097560975609756No Hit
GTACTCAACGCCGGTCGCGACAGCCCACGCGAGTTCGTGCACGTCGCCAG10.6097560975609756No Hit
ACCCAGACCTGCTCAACCGGCTAAGCCAGCTCACCAGTTATGAAGACGTC10.6097560975609756No Hit
GAATACGCGAATAATGATGACCGTGAAGGCCATGCCGGCATACACCCTTG10.6097560975609756No Hit
GTACATCACCGCCCGTCAGCTTCCTGACAAGGCCATTGACCTTATCGACG10.6097560975609756No Hit
ATCCCCGGCTCATCGCTGGCACCGATGATTGCGGCACCAGCCCCGTCAGA10.6097560975609756No Hit
AATCCGAGCCTTCCGCCTAAGTCGAAGAGCATCCGACGGGCGACCTGGTC10.6097560975609756No Hit
GTCTTGTAGTTGTAGTCACCAGCAGACAAGCAGTTGTAGACGAACCACAT10.6097560975609756No Hit
CTGGGTACCGTGACGCAGTAGCTGCCACCTGCGCAAACTCAGATAGCAGA10.6097560975609756No Hit
TCACGTCTACTAGGGAGAGGTAGTAGATCGCCTCGTCGAGATGATCCTTG10.6097560975609756No Hit
GCTCGACGGTGATCGACGCAGGACCGGAACCCGCTTCCTTGGCGGCCACA10.6097560975609756No Hit
CGGCTGTGCGGGCACGTGCATACGAAGGCTTGCCACCAACGTTGCGATGC10.6097560975609756No Hit
CGCGATCGGGGGCATCAGGTCGACGCTATCGTCATCGGCTCGTGGCCGGA10.6097560975609756No Hit
GCCGGAAAGCCAGCACCAAAGTCACCCAGATCAAAATCCAGATGCGTGCC10.6097560975609756No Hit
TCGTCAGGGTTCTCCGGTCGAGCCGTTGGTGAGTGTTGAGGGGGTTGCAG10.6097560975609756No Hit
ATGTCAGAGAGTTGGGCGTATCCGGACTCGTCAAAGAACAGAGGTTCGCC10.6097560975609756No Hit
CTCCTGACCCACAAGATCGGCCCACACGCCGGTCAACACATCGCTCACAA10.6097560975609756No Hit
CCCAATTCCTCGGTGACATCGAGCACCTTCGGTCCCAGCAGGATTTGGAG10.6097560975609756No Hit
GTAATGGCCTCAATGCGCAGAACCAAGTCATCGGGGCTATCCGCCCGGTG10.6097560975609756No Hit
AGCCAGTACATCCTCGGTGAACACCCGGTTACCGTCAACTGCCCAGTCGC10.6097560975609756No Hit
CGCGTAGGGTGCGCTCACGGACGACCTCGATGGCCTGGCTGAGATTACGG10.6097560975609756No Hit
CGCCTGGAACACCCTCAAGAAGGATGTGGCCCTTGGCAAGCACCCCGACC10.6097560975609756No Hit
ACCACGGTGTGTGGGGCGGCATGAGCGAGGACGAGAGGCGCGCTATCAAA10.6097560975609756No Hit
CACCTACATCTTCATCTCCCACGACTTGTCTGTCGTCAGGTACATGTCGG10.6097560975609756No Hit
CAGCATCGACGCCATATCTGATGGTAGATATTTGGCTCATTGTTGCCATT10.6097560975609756No Hit
TAATAAGGCCTTGACGTCGATGTACTTGCTCGTCAGACCACCACGCAAAA10.6097560975609756No Hit
GGATGAGGGCGCCCGGGTTATTGTTTCGAACCTGCCGCGTGCCGTCGGCG10.6097560975609756No Hit
AGCGAATTCTGATCGTCGACGACGTTGTTGATTCCGGTCGCACCCTGGCC10.6097560975609756No Hit
ATCGTGAACAGGATCAAGGTCACCGCAACCGTTCGACGAATCCCCACATG10.6097560975609756No Hit
TCTCAGCCCAGTCCTTGGTACTCATCTAATTCCTCCCTCCCTGGCCATCG10.6097560975609756No Hit
GCCCATGTGGAGGCCGCCCTGTCCCAGGGGCGTGACATCGTCGACTATTT10.6097560975609756No Hit
CGGTTGAAGAGCAATACCGCCACGCACCCCTCAACGGCCTCATCATCGGA10.6097560975609756No Hit
CAGTAGATGAATTCAGCTAGAGCTTGACATGCTGCCCTCTTGGTTTCTTC10.6097560975609756No Hit
GCAGTATTCATCCTCGCGGCAAACTCCTGGATGCAGAATCCTGTCGGAGC10.6097560975609756No Hit
ATCCTGTGTCGCCAAGAAAGATCTGGGCGGGCTTAGCATTCCACCACAGA10.6097560975609756No Hit
GACCAGAGCGATGGCGCAACCGCCGAATCCGCCGCCAGTCATCCGCGCGC10.6097560975609756No Hit
GCGTCGAAGGCGGTACGGACCACGTCGTCTGGGTCGCGCCGAGCACCGGC10.6097560975609756No Hit
GCGAAGACGAGATGACCCCGCTCATCATGCTTGGCAACCGCTACTGGAGC10.6097560975609756No Hit
CCCTGGCGTCATCGCGGCCGCGCTCGTCCTTGCCTTCGATGATCCAATGC10.6097560975609756No Hit
TCGCTGACACGCGTGCCAGGTATGTCAACTGATCTGTCGGATATTTCCGA10.6097560975609756No Hit
CCAGGCCCCTCCCGGGCGACCCGGCCACCAAAACGAGCAGCACACCGACC10.6097560975609756No Hit
TCCTCGTCGGTGGTCTTCGCGGCAGGCTTCTCAGCGGGCTTTCCCGCAGA10.6097560975609756No Hit
CTCCTGAACCGCAGCAAGGTTCGGGGATCCCGTGGCCAGATCCGGCTGAT10.6097560975609756No Hit
GTGCGGTGTCGCTGACGACGTTTTCGACACTTCGATGCACGGTTTCGGGC10.6097560975609756No Hit
CCACCGGGAACATGACAACGGTCGCAGCTCTAGTTGGCTCTGGGCAATTA10.6097560975609756No Hit
CAACCAGACCGCGGCGTTCTCCTTCAACGGCGACGATGCGCTGAGACTGA10.6097560975609756No Hit
GTGTCAACGACCACGACAACCGGAGTTCGGGTCGTCGTGGCGATCTCGGC10.6097560975609756No Hit
GACATGGACGCCGTCGACTCCGACGGCACCATCACCATCACCAATGCTGA10.6097560975609756No Hit
GGACATGTTGTCGATACTGCTGATAGTTTCAGTAACCTCTGACACACGGG10.6097560975609756No Hit
CCCTACGCGGCGCTGCATGGGATTCGGCTACGAAGGTCACTATGACCGGC10.6097560975609756No Hit
GGGGGATGCCGGAGCCTGACCGGCACCTCAAGTATCGCAGGAGTATTCAT10.6097560975609756No Hit
GCGCTATTCACGACGGCGTCGAATAGGGCCAGGGCACGCAACGCCGGGTG10.6097560975609756No Hit
TTTCGTATGTCTTGGGTGATGGCGTCACCCTCATTTCTTCCTCTCATCAG10.6097560975609756No Hit
CCTTCGCATCGCGCAGAGCGACCACATTGGCAACAGGTTGCAGGGTCCAC10.6097560975609756No Hit
ATGCTCGAGTCTTGCCTCAACCCTGAGCTCGCCGCCGAGATTACCTGCCA10.6097560975609756No Hit
ATCTTGACGGTCGCGGGCAACACACCTGCTAAGAATCCCACTCGCCCGGC10.6097560975609756No Hit
GTCTACTGGCATCCCCGTTATGAGTTCAAGCTCGGACTCGTTCGGCATGA10.6097560975609756No Hit
CGATGACATTGCGGAGCGTGCCGGGGTCTCTCGGCGCACCGTCTTCAACC10.6097560975609756No Hit
GGCCTCGGTCGAAGTCGGCGCGCGAGCCTGATCCGAAGAAGGACGAGGTG10.6097560975609756No Hit
AGCCTGCTGTGCGGATTCGCTCACCTGCCCCACAACCGCCGGCGCGGCAC10.6097560975609756No Hit
AGCATGGCGCGATGGTCTGCACCGCCAGCTAGAGGTATTGAACCAGTCTG10.6097560975609756No Hit
ACCTAGTAGGTACGGATCAGCCAGATCGTTGCCGGTCAAGGTCTGCAACA10.6097560975609756No Hit
TGAGAAGGTTTCTGATTCTCCGGCCAAGCTCAAAATCTTTGAGTGGTCAA10.6097560975609756No Hit
CATCATCGTTGGCCATATGTCGATGAAAATGTTCGACCTTATCTACGCAA10.6097560975609756No Hit
GGAAAAGTCGCAGCGGTCAAGATCATCGCATCCTCCCTCGTAATAGGTTC10.6097560975609756No Hit
GGGTCTCGACGTGACGCGGCTTGTCCAGGTAGCGCTCGACGAAACATTCC10.6097560975609756No Hit
CCTCATGCCTGAGTCGGCTCGTTGGTACTTGGCCAAAGGTCGGGTGGCTG10.6097560975609756No Hit
CACCTATAGGAAAAGCGGAAGCTACCGCCACCACCCTGGCAAGATATTCC10.6097560975609756No Hit
TCCCGAGTGTGGGTACCACAGGCCGCGATGCCACTGGGCCGAGCTGTGAG10.6097560975609756No Hit
TGAGAGCACTGACGCCGGATCATTGCTGCGTTCCGAGATGGTGAACCCGG10.6097560975609756No Hit
CCCCCAGCATAGTCATGTCGTGGTCAGTAACACCCTTGCGCACAATATCC10.6097560975609756No Hit
GGCCAACCCGTGCAATTCCCGAGGCCAGGGAATCAATGAGGTGTGGGCGA10.6097560975609756No Hit
GGTCTCGGCCATGACGTCACAGCCGAAGGAGGCCTCGTCAAGGTCGGTGA10.6097560975609756No Hit
CATCTAACTGGTCGGCCAGCTCCAACAGACGTCGCCAGTTGCGCATCTGG10.6097560975609756No Hit
GTCTGAATACCCCTCTCGTCAGTAATGACGATCTCCAAGCCGGGGACGAG10.6097560975609756No Hit
GAATCACTGACCGACGGGGTGACCCTCGGCATCTATGAGAAAGCCCTCGT10.6097560975609756No Hit
GGGGGGTGTCATGGCGGACCTCGCGGATCCGTGCGAGACATTGGGTTTTG10.6097560975609756No Hit
TTTCATCATGAAAAGAGTGAGGCGCTGGCTTCCGAGCTTTCTCCTCGTGC10.6097560975609756No Hit
ACCAAAGTCAGTGCGGACCCATTGGCGACAACCTTCGTCGTGTAACGATG10.6097560975609756No Hit
CGGTTGATGGTGCCGAATACGAATCCGGTTCCTGGGTTGGACCCGTGGGC10.6097560975609756No Hit
ACGGTCTACTGTTCGAGAGGTTCCTCAACCCGGAGCGCGTCAATCCGCCC10.6097560975609756No Hit
ACCCGATCACGACCGCCATACTGCCGAAGAAACATCGTGCAGGACCCGGC10.6097560975609756No Hit
GGGTGGCCGCGTACCGTCATTTACCCGGCTGGGCAGCTGGGATAACGCTG10.6097560975609756No Hit
ACTCAAGCCCATATGTGTCGCGGGTCTGGTTAGACCCGTAGTGGATCCGA10.6097560975609756No Hit
CCACAAGGACCGCTAACACGGTGGAGTGTGCGCTGCTGAGGGTGGGTCCC10.6097560975609756No Hit
TCATCGAACTCATCGATGCGTGGCGTCGTTTCGGACACCTATCGGCTGAT10.6097560975609756No Hit
CCGTTTGACGGGCTCGACCGCTTGATTTCTGAGATAACCGACAGGCCAGG10.6097560975609756No Hit
AGCAAGGACAGCCCTGCCACGGCGACTGCGGTTGTTGCTCGGCGCGTCAT10.6097560975609756No Hit
ACGCTGACCTGTCCTTCCTGTCGGCGTCGGGGATCTTCGAGGCAGGTTGC10.6097560975609756No Hit
GTGACATCCAGTACACGACCTCGGCCCGCTACGCCGACTACGTCCTGCCT10.6097560975609756No Hit
CTCCCGTCGTGTGGCAATCGGGTGTCTAAGCACCGGTCATGCTGCGTGAG10.6097560975609756No Hit
CTCTTCGGGACCCAAGCCCACAACTGTCCGCCGACGTTCGCCCTGTTCAC10.6097560975609756No Hit
CTTTGAAGGAGTGGACGGCAATGTCGGCTTCTCCCTCGAGGAGGGCCGCA10.6097560975609756No Hit
GTGCTGCGCGCTGGCAGTAGCGTGTACTACGACGATCTCGGCGTGCGTCA10.6097560975609756No Hit
TCACTGTGTTGGCCAGGCTGGTCTCGAACTCTTGACCTCAGGTGATCCAC10.6097560975609756No Hit
CTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTG10.6097560975609756No Hit
CGACACTGCCAAAGCTTTATCCATGATGACGTTAAACAGGGCCTCTCTCT10.6097560975609756No Hit
GTCCGGCGAAGCGCCGCTGGCGTGCGCGCGGGCCCTGGCCCCCTACGTCG10.6097560975609756No Hit
GGCCTGGACCGCCTCGATGCCGGTCATCGTCTCGGAGAACTGGATGATGA10.6097560975609756No Hit
GGCTAGGTACTCCTCTGCCCCTCGTAGTGGCCAATATGACCGCAATTTCC10.6097560975609756No Hit
CATCTCGACGGCGTGGCGATGTGGTGCGGGCTGCTTGCGGCGGTGTTCTG10.6097560975609756No Hit
GTACCTCACCGCCCGTCAGCTTCCTGACAAGGCCATTGACCTTATCGACG10.6097560975609756No Hit
GTACCACGGTTCACGCTGTGGAGCTGCGTCCGGGCGGTGGCGCCAAGATG10.6097560975609756No Hit
GATGTTGAGCGTCTTCGCCAGGCCAATTTCCACCGAAGCCTGCGGCTTGC10.6097560975609756No Hit
GCGATCGCCGAGTGCCTGCGCCAGCTCGACGACAAGCCAGCAGCCACCGC10.6097560975609756No Hit
AACCACACGTAGATCGACTTCATCGGGTTGTCCTGCCAGCCTTCTACCGG10.6097560975609756No Hit
GGGTAAAGTCGTGGCGTCGCCGGGCCAGGGGCAACAATTTGAAATTCAGG10.6097560975609756No Hit
GCTTAAGCCACGGCGGATCTTGTCGACGTCTTCCCATGCCAGCAGGATCT10.6097560975609756No Hit
GAAAGGGTGTCGAGGTGGCGGTCGAGCAGGTGAGAGATACCGGTTCGGGA10.6097560975609756No Hit
AGCGCGGTACGACCAGCAAGCAATCCAGTCATTGTCACTCCTCCAACACC10.6097560975609756No Hit
ACCTCTATCTGTCCGCCAACCGCACCTGCGAACTCGGCATGGAACGAGCT10.6097560975609756No Hit
CGGAAATGGTGAAGCAACTAGAACGGATCACCGGCAGCCCGATCGAGTTG10.6097560975609756No Hit
GCTCAACGCTGTCATGCTGCTCAACATCCAGACTCTGGGTTACGACTACA10.6097560975609756No Hit
CTACAAGGGGCCCGAGGCCACCCAGCACCTCATCCGACTGGTTGATGGGG10.6097560975609756No Hit
CCGTTGTTCAGCTGGTGGCCGATGAGGCCTCATGGCATAGACCTTCGGTT10.6097560975609756No Hit
ATGTACGACTCATCAGCATCGACCTGCTGAGGAGACCGTCCCGGCGGGTA10.6097560975609756No Hit
GGGGAAATAGCCGCCGATGGTGTGGCGGTACTGCCGGAGAATGGGTTGGA10.6097560975609756No Hit
AAGGTGTAGTAACCGCGCACGGCATTGAGGTCATCCTCGCTGAAACCATG10.6097560975609756No Hit

[OK]Adapter Content

Adapter graph