FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003653021

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003653021
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92
Sequences flagged as poor quality0
Sequence length100
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTTGGGCTAAGGGAGGGACCAGCACCATGTCCTTCTGGAGACCCGGAA22.1739130434782608No Hit
CAAGTGATCCACCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTG22.1739130434782608No Hit
GTCTGAGGATGTCGATGTTGGCGTACAAGCTGAAGGCCCTGGAGGCTTGT22.1739130434782608No Hit
GGCGACCCGAAGCTCGTCGTCGAGCGCCTGTGGCTGCTGCTGCGGCGGGT11.0869565217391304No Hit
CTCGAACTTCCGGCCCTTGGAGCGGACGTAGGGTTTGGTGTGGCTGTGCG11.0869565217391304No Hit
GCGCAGCCATGGCAGCTACCGACAGCATGAGAGGGGAGGCCCCAGGGGCA11.0869565217391304No Hit
GTTGGCAGAAGCTGGCCGAGCTGGAGGGCCGCCAGGAGGAGCTGCTGCTG11.0869565217391304No Hit
GTGCCACTTCTGTGCCAGCATGATCAGCGGTCTTGTCACCACTGCTGCCT11.0869565217391304No Hit
GTCCCTGGCTCTAGGCCCAGTGACCTGGGGAAGAACGCAGGGGACACGCT11.0869565217391304No Hit
TCAGAGCCCAATGCTACCCAGCGCTCCTCTCCCCTTTTCCCATTCCTTGG11.0869565217391304No Hit
GTCATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTAT11.0869565217391304Clontech Universal Primer Mix Long (96% over 26bp)
GGCCTTAGAGGTCGTCGTGGCCCAACCCCAGGTTCCGCAAACTTTCGTCT11.0869565217391304No Hit
GAGGTGGGTCCGCCTCAGTAGGGACGCTTCCGCCGCCGTCACACTGCCCT11.0869565217391304No Hit
TGCTTGTCCTGGCTGGACGCTACTCCGGACGCAAAGCTGTCATCGTGAAG11.0869565217391304No Hit
GCTGGGTACATGGCGTCTGTTTCTCAGCCAGCGGGAGCCGCGTGGCCTGG11.0869565217391304No Hit
CCTCCCACTTGTGCTTGGTGGTCTGAGCTGCCATGTCCGCCGCGGTCCAA11.0869565217391304No Hit
CCGGTGCAGGCGGTGTTCCCTGCCCAGGGAGGAGATACTGGCTCGGGGGT11.0869565217391304No Hit
NGATTACATCGCCCTGAACGAGGACCTGAGCTCCTGGACCGCGGCGGACA11.0869565217391304No Hit
CAACAAGGCGACCCACCCTTTCGGATGGGTCGCCTTGACGTCAGTGTGGT11.0869565217391304No Hit
GTGGAGCTCTGGCGCCTCAGCTCTTCCCAGAGCAGCTCCCGGCTCCTGTG11.0869565217391304No Hit
GGAGCAGCCTCCGCTCCCGCTCAAACTCCTTCATGCGCATCACATAGTCG11.0869565217391304No Hit
GGTTGGCGTGGAGGCCCGTGGGGATGCTGTGCCTGCGGGCCAGCTCCGCC11.0869565217391304No Hit
GCGGTGTAGTCGCAGGGCAGGCCGGCTTGGCCTGCGCGGGGCTTGGCCGA11.0869565217391304No Hit
GCGCTCCGGGGAGACTTTCGGCTCCGGCTCCCACCGCGCGCCTCGCCGCC11.0869565217391304No Hit
GGCCACCACATCACAAGCGTGATGGCACCTGCTGGTGCAGCTGCAGTCCC11.0869565217391304No Hit
GTCCACAATGGGGCATGGACTGCGGTCTGAAGAGGGCCTGTCCTCACTCA11.0869565217391304No Hit
GAGGCTGACCTGTGTCAGGGAGAGGAGGCGGCGAGAGAGGACTGCCTTCA11.0869565217391304No Hit
AGTGGAGCCTGCGGCTTAATTTGACCCAACACGGGAAACCTCACCCGGCC11.0869565217391304No Hit
AGATCTGGCTGACGCTGTTCTTGTGCAGCGAGTCTAGGCCCGCGCCCGCA11.0869565217391304No Hit
ATCCCAGCAACGTGGGAGGCTGAAGTGAGAGGATTGCTTGAGCCCGGGAG11.0869565217391304No Hit
TCGCCGTTCTCGTCGGTGAAGACGCGCGCCCCCAGCGTGTAGGCTGTCTC11.0869565217391304No Hit
CATCCTCCTTGCTCAAACTGTCTGGATGGGCAAGCCGGAAGAGGCAGTCA11.0869565217391304No Hit
GGCCTGGAGCCAAGGCCACCTGTGGCTGGACAGCAGCAGCCCCCTCAGAG11.0869565217391304No Hit
GTACCTGTTTAGCCACGATGGCCGCCAGGCGGCCCAGGAGATGGCCTCGA11.0869565217391304No Hit
AGCAGGCACACAAACACGCCCGCCACAATGGAGTAGGCACCAAAGTACCA11.0869565217391304No Hit
GTCCAAGGTCGTGCACAAGTCTTTTGTGGAGGTCAATGAGGAAGGCACGG11.0869565217391304No Hit
GTAGGCGACCCGGACGGAGGGCCGGCGAGGTGCGGGGTCTGGTGATGCGA11.0869565217391304No Hit
CACTGTGGCGGTCCCCGTCCTGGCTATGAAACCTTGTGAGCAGAAGGCCT11.0869565217391304No Hit
TGGCTGTGATCACCAACCAGCCAGAAATTGCTGAGGCACTTCTGGGAGCT11.0869565217391304No Hit
GTCATGGTGGCCAAGAAGGATGTCCACATGCCTAAGCACCCGGAGCTGGC11.0869565217391304No Hit
AGCTAATACATGCCGACGGGCGCTGACCCCCGTACCGGGGGGGGTTCGTT11.0869565217391304No Hit
TCTCGGTTCACTGCAACCTCTGCCTCCCTGGTTCAAACAATTCTCTTGCC11.0869565217391304No Hit
CATGCTGGCGGGAGTGGGCGGTATCGACCACGCCCTGCTGGTGGTCGCCT11.0869565217391304No Hit
GGCTAGTTGGCCAATGATAATAAATGGGTGTTCTACTGGTTGGCCCCATG11.0869565217391304No Hit
AGCCGCGGGAGAGCGTGCAGCCGAGTCACTACTGCCTGCCTGCCTGCCTG11.0869565217391304No Hit
GAGTGAGACTCACCTGCTCCTCTGGCCCCTGGTCCTGTCCTGTTCTCCAG11.0869565217391304No Hit
TGGGGACAACTCGGTGGTGGCCACTGCGCAGACCAGACTTCGCTCGTACT11.0869565217391304No Hit
GACAGGGTTTCACCATGTTGGCTAGGCTGGTCTCGAACTCCTGACCTCAG11.0869565217391304No Hit
GCCTGCTGCAGTGCTTGCCACGGAAGCGGATGCGGCAGCATCCTCTGCTT11.0869565217391304No Hit
AGACGGAGGGCGAGTCCTTGTAGCCCACGATGGCCGCGTCCTGACAGGTC11.0869565217391304No Hit
CCTGGGTGCGCACAGTCACCCAGCGGCCCACACGGTGCTCCTGGAACTCC11.0869565217391304No Hit
GCCTCTAGAGGCGCAAAGGCCAGCATCGGAGGACCCTGTGGCAGCCAGGA11.0869565217391304No Hit
CATGAAACACTAAGGGTCGTCACGCCCTCCCGAGGAGCTCAAGGACCTGC11.0869565217391304No Hit
CCCGTCACCACCGCCATCATCCACCGGCCCCACGCCCGCGAGCAGCTGGG11.0869565217391304No Hit
GTTCTGGAGGCTGCAGGGGCCCCCACATCCACTGCAGCTCCGGAAGCGGG11.0869565217391304No Hit
GAGTACATGGGTACCTGGTTGATCCTGCCAGTAGCGTATGCTTGTCTCAA11.0869565217391304No Hit
GCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAAT11.0869565217391304No Hit
TCCGCGGACAGAGCGCGCGCCCCCTGGCCCTGTCTCTTATACACATCTCC11.0869565217391304No Hit
AGGCCAGGATGGAGCCGCCGATCCACACGGAGTACTTGCGCTCAGGAGGA11.0869565217391304No Hit
CAGTATGACGACATTGTCACCCGCAGCCGGGCCGAGGCCGAGTCCTGGTA11.0869565217391304No Hit
GCCAGGAGCACGACTTGATCTTCCGGGGCAATGCCCTCCAGTGAGGCTAC11.0869565217391304No Hit
GGCCGGGACGCTCCCACGGGCGAGCAAGCCTGCTCTGCCGTCGAGGAGGC11.0869565217391304No Hit
GGAGAGGAGCGAGCGACCAAAGGAACCATAACTGATTTAATGAGCCATTC11.0869565217391304No Hit
GAGTGCAGCTGCCGCTACCGCCGCCCTCTGCCCGCCGGCACGTCTGTCTA11.0869565217391304No Hit
AGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACC11.0869565217391304No Hit
ACCTTGAGGGCAGCAGGAACCACCATCCGCTTTTTCTTGTCGTAGGGCTG11.0869565217391304No Hit
GATCTACGGGCACTGGAGCATAATGAAGTGGAACCGTGAGCGCAGGCGCC11.0869565217391304No Hit
TAGGTGGCGATCTCGATGTCCAGGCCCAGCTTGGAGTTCATCACCTCCTG11.0869565217391304No Hit
GGCTGGCATGGGGGACGGCGGCTGCCAGAGTGAGTGCCCGGCCCACCAGG11.0869565217391304No Hit
GGACGAAGGTCTCCATAACAAAGGCCTTGTAGACACTGAGGAACATCAGC11.0869565217391304No Hit
CCCGTGCACTGTGCTCCGGTAGCGCGCGAAGTCGTAGTCAGGGCCGCTGC11.0869565217391304No Hit
TTCCAGCACGTCATAGTTGGCCTTGATCTGCGCTTCTATCTCCTCCTTGC11.0869565217391304No Hit
GGCACGATCTCAGCTCACCGCAAACTCCACCTCCCAGGTTCACGCCACTC11.0869565217391304No Hit
CACCTGTGGGGCTCATCGTCAGCCACCTGCCCTTTGGTCCTACTGCCTAC11.0869565217391304No Hit
TCCCACTGCTGCACGCGTCTGTCCGTTCCCGCGGCAGAGCTGGCTGTGGT11.0869565217391304No Hit
GGCTTCTTGATGTGCTTGCAAACCCACCAGTCATTCTCCTGCTCGAAATA11.0869565217391304No Hit
GACAGCAACAACCTGTGCCTGCACTTCAACCCTCGCTTCAACGCCCACGG11.0869565217391304No Hit
CGCAGGTGGGCTCTTGCCAGGTCGTAGTACTCAGGGCTCAGACGAGAGAA11.0869565217391304No Hit
CGATGGTAGTCGCCGTGCCTACCATGGTGACCACGGGTGACGGGGAATCA11.0869565217391304No Hit
GCAGCTGCCAGTGCTGATTTTCCTCGCCGTTGAACGGCGCGCCGTGCCAG11.0869565217391304No Hit
CCTCTGGCACAGGCACTGGCACTGACGGACAAGGCGAAACAGCGGCCCCT11.0869565217391304No Hit
GTTCGTAGGTCGCCCGCGCCGTCTCGAGCCTTTTTCCCACGCTTCCCCGG11.0869565217391304No Hit
CAGGGCACCCACTGAGCCCACCGCGACTTCTGCCCTGGAGAGCGTGGGGT11.0869565217391304No Hit
GGGTTAGGTGCCGCTGTTGCTGCTCGTGTTGAATCTAGAACCGTAGCCAG11.0869565217391304No Hit
TAGCCGGACGGGGATCTGAGCTGGCAGGATGAATGTGGGGGTGGTACCTG11.0869565217391304No Hit
ACCTTATACAGAGCTGCGGCCTGGGCATTTGCCTTGTCAGCTGTGAGGTC11.0869565217391304No Hit
TCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCC11.0869565217391304No Hit
GTGCCATATAAGCTGTTGTTCCCACAATTCTGCTAGTCATGACTGTCTGG11.0869565217391304No Hit
TCGCAGCATCGTCGACAGATTGCAGTATTTCGTACTTGTCTTCTGTTACA11.0869565217391304No Hit

[FAIL]Adapter Content

Adapter graph