FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003653022

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003653022
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences92
Sequences flagged as poor quality0
Sequence length100
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGCTGGGGTGTTCCCCTCCCAACCTAGTGTTCAAGCATGGCTTCCTGGC22.1739130434782608No Hit
CAGCAGCAGTTACAAAAACCTTCCCCAGGCTGGACGTGGTGGCTCACGCC22.1739130434782608No Hit
CTGATGCAGCTGATGCAGCTGCTGCTGAAGAGGAGGATGGAGAGTTCCTG22.1739130434782608No Hit
CGGTCGGCCTTGGTCAGCGCCACCGTCAGCGACGGATTGCCGGTCAGCTG11.0869565217391304No Hit
CCGGAGCTTCCTGAGGACACACCAGCAGGTCGCCTCCAGCCTGACCAGCA11.0869565217391304No Hit
TTTCCAAGCGGCTGCCGAAGATGGCGGAGGTGCAGGTCCTGGTGCTTGAT11.0869565217391304No Hit
CTTCATGATGATGGCCTCCTCCTCCAGGTTCTCCCGAAGCATCTGCAAGG11.0869565217391304No Hit
GCCTAGCAGTGTCCCAGCCGGGTTCGTGTCGCCATGGGGCAGATCGAGTG11.0869565217391304No Hit
CCACCCACGGAATCGAGAAAGAGCTATCAATCTGTCAATCCTGTCCGTGT11.0869565217391304No Hit
GCCTTGCACGGGCTTCTGAGAAGTTTGCCCAGACAGTCATGACTAGCAGA11.0869565217391304No Hit
TGGTGGCACTCTGTACCTGCAAGGCCACTCAGAGGCCCCCGTACTGCGAT11.0869565217391304No Hit
GCCCTACTGAGGGGACACTCACAGGTGAGCAGGTGTTCACAGGTGAGGAC11.0869565217391304No Hit
TCCTGGGAGCAGGCTTAGGGAAGGAACTCAGGGACCCATACAGGGGGTTC11.0869565217391304No Hit
GTACATGGGGCCAACCAGTAGAACACCCATTTATTATCATTGGCCAACTA11.0869565217391304No Hit
GGCCACGACTGCTTCCCGGTGCTGTTCACCTATGACGCCGCCGCGGGGAT11.0869565217391304No Hit
GGCCACAGTCCACGTGGTCCCGGGACCAGCACTCACCACCACGTCAGAGT11.0869565217391304No Hit
TGCCTGATCACCGTGGCCTTCATCTCCTCACACTTGCTGCGGTACCAGGA11.0869565217391304No Hit
GATCTGATAAATGCACGCATCCCCCCCGCGAAGGGGGGACGCCCCCCTGC11.0869565217391304No Hit
GTCTGGCACCGGCAGTGGCTCTGTGTCCCACGCCATCATCCGCACCATTG11.0869565217391304No Hit
GGCCCAGCCCTGGTCCTGACAGGCAGGTCCTTGAGCTCCTCGGGAGGGCG11.0869565217391304No Hit
TGATGGCCCTGGTGAACCCTGTCTATGACTGCCTCTTCCGGCTGGCCCAG11.0869565217391304No Hit
GCGGTGGCCGACGCGGATGCCCCCACGCTCGGCGATGCCACCACGGAGGA11.0869565217391304No Hit
GGCTGAGGCAAGAGAATTGTTTGAACCAGGGAGGCAGAGGTTGCAGTGAA11.0869565217391304No Hit
ATCGAGCACGATGTCGCCTGCGATCTCCTCGATGCCGAGTTGCCGCACCC11.0869565217391304No Hit
CGGCAAGGTCATGACAAAGTCCGTGCGCCTGAAGGCCCATGATGAGAACA11.0869565217391304No Hit
GGAGAAGCCCACAACCGCCCTCCTGGACAAGGTGGCCGACAACCTGGCCA11.0869565217391304No Hit
CGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGCCCTATCAA11.0869565217391304No Hit
CAGCAGCTCCTCCTGGCGGCCCTCCAGCTCGGCCAGCTTCTGCCAACCTG11.0869565217391304No Hit
CTCTTGGACATTGGTGCCAGGCCACCAACTAATGTTGACCAAGGACTGGG11.0869565217391304No Hit
GCCCTGGACTCCCCTAAGGGCTGTGGCACTGTCCTGCTCTCCGGTCCTCG11.0869565217391304No Hit
CCCTACGACAAGAAAAAGCGGATGGTGGTTCCTGCTGCCCTCAAGGTCTG11.0869565217391304No Hit
GGCTGTGCAGCTTGACCTCTGTGTCTCAGGCTGGGGGTCTCTGCCCCTGG11.0869565217391304No Hit
AGATGACAATGGCTGCTTCCCCCTGGACGGTCACGTGCTCTGTCGGAAGT11.0869565217391304No Hit
CCTGGAAGATGCTGCACATGGGGAGCACGTCCATGTCGGGCCGGGTTGGA11.0869565217391304No Hit
GAGTACGAGCGAAGTCTGGTCTGCGCAGTGGCCACCACCGAGTTGTCCCC11.0869565217391304No Hit
ACCTGGTGCCGTCTTGCCAACTGACGCAGTCGTCGTCCGATCTCGATACC11.0869565217391304No Hit
CCATAAAACAGGGTGTGAAAGGCATCTCAGCGGCTGCCCCACCATGGCTA11.0869565217391304No Hit
GGTCAGCGCCAGCAGTGGTAGTGTTTCAGAGGCCAGAGTCGCGACGGCCA11.0869565217391304No Hit
GGTGGGGCTTGGCCTCCGACATGGTGCCCAGGTCTGGGATGTCATGCCGC11.0869565217391304No Hit
TGCTCTAAGCATGCAGAAAGCACAGGACACTGCTCCCGGGTGGGGGCTCA11.0869565217391304No Hit
GACCAAAACCTCCTTCTGGAAGGCCGAAGTCCCACAGTGCCGGGGAGCGC11.0869565217391304No Hit
CTGCAGGGCAGTGTGACGGCGGCGGAAGCGTCCCTACTGAGGCGGACCCA11.0869565217391304No Hit
GTCCAAGCTGCAGCCACAGCGGATGGCAAACCACAGGAAGGAGCTGAAGA11.0869565217391304No Hit
TGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCG11.0869565217391304No Hit
CCTGGGGCTATGTAACTGAGCTCGTCGACTTAGGGGTCCTTCTTCGCTGC11.0869565217391304No Hit
CCGCGGGGCTGTGCGGAGGCGACGGACGGCCGCGTCAAGCCACCCAGCGC11.0869565217391304No Hit
CCATGACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATAC11.0869565217391304Clontech Universal Primer Mix Long (96% over 26bp)
ACCGTATTGTGACCTGCGGCACAGACCGCAACGCCTACGTGTGGACGCTG11.0869565217391304No Hit
CATCTTTTGCTCGTCCTCCAGTCCCATGTCTGGCTACGGTTCTAGATTCA11.0869565217391304No Hit
GTGCAGGACTGAGTCAGGACTCCCACGCTGGCCAGGCAGCCCTGCTCACA11.0869565217391304No Hit
GAGTGTAGGAGGGCGATCTCAGCTCACTGTAACATCAACCTCCCGGGCTC11.0869565217391304No Hit
AGCCAGCAGACCCCCGAGCCAGTATCTCCTCCCTGGGCAGGGAACACCGC11.0869565217391304No Hit
TGCCTACCATGGTGACCACGGGTGACGGGGAATCAGGGTTCGATTCCGGA11.0869565217391304No Hit
CTCGATGGGCTGGCACGGCGCGCCGTTCAACGGCGAGGAAAATCAGCACT11.0869565217391304No Hit
GGGATGGGCAGCGCGAAATCTTGCCGAGAGGCGCAGCTCGCATCACCAGA11.0869565217391304No Hit
CTCCAACATCAGTCTGGTCCATTACATCGTCGCGTCTGCTCAGGTCTGGA11.0869565217391304No Hit
CCCCAAGGGATCGGTCCCTCTCACTACGGCCAACTCCTCACTCGGGCGTT11.0869565217391304No Hit
TCCACCAGCTGCAGGCTGAGCGCGCGCAGGGCTTCCGCCGACTGGAGGAG11.0869565217391304No Hit
GCTCTACCCCTACCTGGCCTGGCTGGCCTTCGCGACCACACTCAACTACT11.0869565217391304No Hit
CCGCAGCCCTGCAGTCTAGTGTCAGCCAAGAACTCCAGGATGAACTGGAG11.0869565217391304No Hit
GGACGAATCTGGCACACCGCATCATCATGATGGCAGCTGTGGCGGCTGCA11.0869565217391304No Hit
TGCTGTAGACGCGCAGGCCGCTCATGCTGGGGGTAGACAGACGGGCCGGC11.0869565217391304No Hit
GGCCGGTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCT11.0869565217391304No Hit
GAGTACATGGGAGCCAGGCATGGTGGCTCACACCTGTAATCCCAGCACTT11.0869565217391304No Hit
CCTCGCAGGCCGGCGCCGTGACTGTCAGCGACGTCCAGGAGCTGATGCGG11.0869565217391304No Hit
TGGCTGTAGGGGCGATCTGAGGTGCCATCATCAATGTTCTTCACGATGAC11.0869565217391304No Hit
TGCAAAAGGAGATCACTGCCCTGGCACCCAGCACAATGAAGATCAAGATC11.0869565217391304No Hit
GGTCGAAGGTGATGCACACCTCTGCAACACTTCCAGGCTGGAAGGGAAAG11.0869565217391304No Hit
GTACCACCCCCACATTCATCCTGCCAGCTCAGATCCCCGTCCGGCTACTG11.0869565217391304No Hit
CCGCGGACGACTTTGGTTACTGCCCGCGACGCGATGAGGGTATCGTGGAG11.0869565217391304No Hit
CCCAGTAGCAGCGCCATGGCCGGGTGGAACGCCTACATCGACAACCTCAT11.0869565217391304No Hit
CGTGCGTACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATACGCTA11.0869565217391304No Hit
NGGTAGGCTCTCAGCTGCTCCGCCACACGGGCCGCCTCCCACTTGCGCTG11.0869565217391304No Hit
GTCCAGAGGATGTATGGCTGCGACGTGGGGTCGGACTGGCGCTTCCTCCG11.0869565217391304No Hit
GGCCAGGGGGCGCGCGCTCTGTCCGCGGACTGTCTCTTATACACATCTGA11.0869565217391304No Hit
CCTGCAAGCAGGAGCGGCACGACTGGGACTACTGCGAGCACCGCGACTAT11.0869565217391304No Hit
GGCAAACTGTTCCTTCACGTAGCCTCGGGACTTGAGAGACTGCATGGCCT11.0869565217391304No Hit
ACCTTGGGCTGGGAGAAGGGCAAGCCAGTGGCCTCCATGTCGAAAAAGAT11.0869565217391304No Hit
GCCAAAGCCAGTGGGGAGCTCAGCACCATCAGTGTCACTGTCAGAGCTGC11.0869565217391304No Hit
GCCCACGGTCTGTACTGACGCGCCCTCGCTTCTTCCTCTTTCTCGACTCC11.0869565217391304No Hit
CTGCAGTGCAGTGGCATGATCCCGGCTCACTGAAGCCTCCACCCCAGGAG11.0869565217391304No Hit
GCCTTCTGCTCACAAGGTTTCATAGCCAGGACGGGGACCGCCACAGTGCT11.0869565217391304No Hit
CCTACACGCTGGGGGCGCGCGTCTTCACCGACGAGAACGGCGACTGTCTC11.0869565217391304No Hit
GTCTGAGCAGCAGGGTGAGGCGGCCCTCAGCGATGCCCGCTGCAAGTTGG11.0869565217391304No Hit
TCCACAGGCTGAAGAAGCCCTCGTAGCGGACAACTTTGAACAGCACGTCC11.0869565217391304No Hit
GCCATTGGGTGCCCTCCCAGTTGAGAGGGGCCGCTGTTTCGCCTTGTCCG11.0869565217391304No Hit
TCCTTGTGGAGGGCGGCCGCACCCAGGACCTGCCAGGCGTCAAGCTCACC11.0869565217391304No Hit
TTGTCACTGATGGGGAGGAGCCTGCTGAGATGATCCAGGTCCTGGGCCCC11.0869565217391304No Hit
CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAATAACA11.0869565217391304No Hit

[FAIL]Adapter Content

Adapter graph