FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003654208

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003654208
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length100
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCACTGGCAGTCCACCCGTAAGGCGACGAATGGCGAGTCCGGACGCGGT318.75No Hit
TCCATGCGTTGCGTCAGCAGATCGGCGGTCGGTTCGTCGGCGGCCTTGTC16.25No Hit
ACCCAGAAACGCTCACCTTTGGCGTTAATCCACTGGTAGGTGTGGGAGGA16.25No Hit
TTCAGGTTGCATTACCAGACACCACGGTAGTGCAAGGGCAGTAATGTTTC16.25No Hit
TCCATGAACATCCTCATCATCTTCCGCAGGTTGAAAAACCCCAGAGGACA16.25No Hit
CAGTGACTACACCGTGGTCTCGGCGCTCGGGGCGGGGCGCGATGCGACCG16.25No Hit
GTGAAGAAACTCTCTTGCAGCTTAAGAAGTTTGGTGAGGACCAGGCTGAC16.25No Hit
GTCGTAAAGGATATTTGAATTAGGGTTGTAGTCCTTGACCATGACCTTGG16.25No Hit
GTCGCCAGCCTGCACGATCTGAACCTCGCGTGGTCGCTGGCCACGCACGC16.25No Hit
GGGCGAGACTGCGGCCTTCCTCGAAAAAGCTCTTCAGGCCCAGGCGGTAC16.25No Hit
GGATCGGATGGGATCGGCCGGTTGATGCCGCATCCGGGCGTGACCCTGTC16.25No Hit
GAAAAGAATAGTTCGTTCTGGACGGAGTAAAGGAAGAAAGGCGAGAGAAG16.25No Hit
GGCCCTCCACCATGAAGGCCATTGCCGGCGCCCTGGGTGAGATCAACCAG16.25No Hit
GGGTAGCCACCAGGGTGGTCACCTGGGTGTCCCGGGTGCCCTGGGTGTCC16.25No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)