FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003654210

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003654210
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20
Sequences flagged as poor quality0
Sequence length100
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCACATAGCACTAAGTCTCGATAATTCAGAGACTTGACGCCAATCGCCG210.0No Hit
CCTTTCTATCCGGCTATCTCGAAGGCTATTCAGGATAATGTTTATGCGGC210.0No Hit
ACCGTGTACGCGCCGGCGCCCAAGGCCCGCAGCGGCCCGGCGCGCAGCTC210.0No Hit
CCACGACACCATCCTCTTCTTCACCACGAAGGGTCGCGTCTACCGGTTGA210.0No Hit
GCCTCACCGTCGACGGCCGCTGGACGGCGGCACAGCCGCTCGCGGAGGTG15.0No Hit
GGGCATCCACGGCGTCATCGAGTTCGGCAACCGCACCCTCACCGGCATCC15.0No Hit
CACCTCGGCCGCGGACGTCGCGGCCTTCGCCGCCGCGCTCGCCGAGGTGC15.0No Hit
GTTTAATACTTCCCACATACCTCGTGATGATTGCTGTATGAGGAGAAGGA15.0No Hit
TTCGAGGGCGTGCTGGATGCGCTGGTCACCGCCCTGATCGCGATGCACGA15.0No Hit
CCTTAGTGTTGAATCTTTTATCAAAGCTAGAACTGGCCGCCGAGTACAGG15.0No Hit
GTCGTAAAGGATATTTGAATTAGGGTTGTAGTCCTTGACCATGACCTTGG15.0No Hit
CTGTATACCCTCGCGAGCAGGATCGGACGTGACTGTGGGGGTAAAACCAT15.0No Hit
TGGGTGTGGTAGGCGTTCCATTCGTCGCGCTTGAACTCGACAAAGGCCTG15.0No Hit
GGTTTGTGACCTCGTGACGCAGCAGGTTGCGCTTGCGCATCTGCCGTTCG15.0No Hit
CTGGGGGCACCATAGGGGGACTGCCCCGACCCCAGTAGGTTGAGGGCCGT15.0No Hit
GTTCCGCAAGGGTCAACGGCGGCGCACGATCTTCGTCTGTATTTTCTGGA15.0No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)