FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003654269

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003654269
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences89
Sequences flagged as poor quality0
Sequence length100
%GC54

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTTCAGGAGCTCCTTAGTAAAGGACTTATCAAACTGGTTTCAAAGCAC22.247191011235955No Hit
CCAGAACTACCACCAGGACTCAGAGGCCGCCATCAACCGCCAGATCAACC22.247191011235955No Hit
CACTGTCAGGGCCCCCAGCAGGGCCTTCAGGGCCTTCACGGCCCCCACGG22.247191011235955No Hit
TCCTCTTCCTGGTGGCTTTTGTGGGCTGCTGCGGGGCCTGCAAGGAGAAC22.247191011235955No Hit
TTTCTGAGATGCTTGTGGTTTATTGAAGAGAGCAAGGCTGGTGGGCGTGG22.247191011235955No Hit
GAGCCAACACAGGCCTGGAGCATTGCCTGTGGTATGGCCTGCTCGCTGCT11.1235955056179776No Hit
GAGTAGCTGACTCAGCTTCCTCATCTTCATCTCCATCCTCTTCCTCACCA11.1235955056179776No Hit
CTCTTGATACTCACCGGGAGGAGGGTTTAAGTAAACGCCATTACATGTAA11.1235955056179776No Hit
GTGTAGATGCTCCAGTCTCGGCTCAGCCAAACACTGTCAGGGCCCCCAGC11.1235955056179776No Hit
GTTCCCCAGGGCACTGTTGTCCACCACTCGTACCCGCGTCATCTTCTGAA11.1235955056179776No Hit
GACTCAAAGCATGGCAGCGGCAGAGGCTGGAGCAGTTGGGGATCTTCAGC11.1235955056179776No Hit
GGCCACAGGCTTGGCCGAGCCCACTAAGAAAGCAGCAGCGGAGCTGCAGG11.1235955056179776No Hit
GTACATGGGAAGCCAGTGGTATCAACGCAAAATAAAAAAAAAATAAAAAA11.1235955056179776No Hit
GCCCTCTTCTCAAACGCTCGCCGGCTCTAGGACCTCTCCACCAGCACAGT11.1235955056179776No Hit
GTACATGGGAGCCCCCCTACCGACCTGGTGTGGAAGGCACAGAACACCTG11.1235955056179776No Hit
GCCCTTGGCAGCATTGATGAGCTCATCTGCCAGGCACTCAGCAATGGTCT11.1235955056179776No Hit
CTCCTACCCCGCGGGGACGGAGGACGACGAAGGGATGGGGGAGGAGCCCA11.1235955056179776No Hit
CTCTTCCACCCCTGCCAGGCCCAGTAGCCACCACAGCGCCTGCTTCCTCG11.1235955056179776No Hit
CCTCATACTAGGCCTACTAACCAACACACTAACCATATACCAATGATGGC11.1235955056179776No Hit
AAACGGGATCAAACAACCCCCTAGGACTCCCCTCCCATTCCGATAAAATC11.1235955056179776No Hit
CTTCAGCGGGTTGAGGGTGCCGAGGGGGTTGGCCAGGGTCCCGGCCCCGG11.1235955056179776No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT11.1235955056179776No Hit
ACCTCATAGAGGGCTCCCAGAAGTGTGTGGCTGAGCTGGGTCCCCAGGCC11.1235955056179776No Hit
GTGTTTGGGAGCCTCATCATTGGTTATGCCAGGAACCCTTCTCTGAAGCA11.1235955056179776No Hit
GGGGTCTACCTAGGTATGCCTGGTTGCCTGCCTGTATACGACGCCCTGGC11.1235955056179776No Hit
GTGGTGGCCTTGGTATGTGCTTTCTCGTGTTACATCGCGCCATCATTGGT11.1235955056179776No Hit
CGCTCTGGTAGACGGAGGATGACTTTGTCAGTCTTCTGGCTGAAGGGCCT11.1235955056179776No Hit
GGCTGTAGCATGGCACTTGCTGAGCCTCCAGCCTTGAAGGAGTCTCTCTG11.1235955056179776No Hit
ATCATTGGTATATGGTTAGTGTGTTGGTTAGTAGGCCTAGTATGAGGAGC11.1235955056179776No Hit
CCGGGGGCAGGGCGAGGAATGGAAGTTGGAGTACGTGGGATACAGGTCAT11.1235955056179776No Hit
GTCCTTTAGTGTTGTGTATGGTTATCATTTGTTTTGAGGTTAGTTTGATT11.1235955056179776No Hit
AACATATCTGAACACACAATAGCTAAGACCCAAACTGGGATTAGATACCC11.1235955056179776No Hit
CGCCTGTAACACCTGCACTTTGGGAGGCCGAGGTGGGCGGATCACCAGAT11.1235955056179776No Hit
GGATTAGGATTGTTGTGAAGTATAGTACGGATGCTACTTGTCCAATGATG11.1235955056179776No Hit
AATTTATATTTATCAGTTATTGAGATGAACCCCTCTCAGTAATTTTTTTT11.1235955056179776No Hit
GGAGCGGCCGCAGATCGGAGGCACCATCAAGCAGCCGCCCAGCCACCCCC11.1235955056179776No Hit
CGCCGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATATATTGTTG11.1235955056179776No Hit
CTGCCACGCTGGCAGAGCTTAGTGACCTTGCTGAGTAGATGCTGCCAACG11.1235955056179776No Hit
GGGCGTGCTGTCCTTCTGGAGGGGCAACCTTGCCAACGTCATTCGCTACT11.1235955056179776No Hit
CCATGGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCG11.1235955056179776No Hit
TCCTGATACTGCTGGTGCTGGGCTGGGTCCAGCCTTCCCTGGGCAAGGAA11.1235955056179776No Hit
GTTCATGACCTGCTTAGCTAAGGCGTTCACCAGGAAGGAGAGCTTATGCA11.1235955056179776No Hit
GTTGGGGATCTTCAGCTTCTAAATGCTAATTACACAGTGAGCTTTGGGCT11.1235955056179776No Hit
CCCTCTATGAGGTGGTTCACGGGGATGCCCAGGCTGCTCAGCAGGAGCTT11.1235955056179776No Hit
CCATGGAGAAGATGAAGCAGGTGGTGACACAGACTCGGTGGATGAGGCCA11.1235955056179776No Hit
TCACAGGTGTGAGAGAACAGGCGCAGGGTGAAGAGGCAGGGAGCCAGGGA11.1235955056179776No Hit
CAGGAGAGGTGGGTTTCCACAAGGAGGCTGGAGTAAGCACAAGGGCATCC11.1235955056179776No Hit
CTGCGTGGCCCTGTCCTGCAGCTCCGCTGCTGCTTTCTTAGTGGGCTCGG11.1235955056179776No Hit
GGATTTAAAGTGGACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTA11.1235955056179776No Hit
TGGCTCCACTTTTCCTCATGCTTAAAGACACAGAACGTTTAGGGTGTCTG11.1235955056179776No Hit
AGCCCATGATCCTGCTGGTGGGCCAGTACAGCACCGGCAAGACCACCTTC11.1235955056179776No Hit
ACTTAGCTCCGGGTTAACTTCCATCAGGCCCAGTCCTCTCCTCCCCAGCA11.1235955056179776No Hit
TCTGGGAGCCCTCTATGAGGTGGTTCACGGGGATGCCCAGGATGCTCAGC11.1235955056179776No Hit
CCCCATAGCCATCAAAAACTGGACCAACTGGCCTCTTCCTTTCCCCTGGG11.1235955056179776No Hit
GCGGTGCCCACTCCACTCCTTGTGTGGCGCTAGGCCCCCCGTCCCGGTCA11.1235955056179776No Hit
CCCTCACCCTGGTCACACTGGCTCTCTGCTGCAGCTCCGCTTCTGCAGAG11.1235955056179776No Hit
GTGATGGGATCAGAGTCAAAGAGCTTCACGACCACCTCAGTGACACCGGA11.1235955056179776No Hit
GGCCAACCCCCTCGGCACCCTCAACCCGCTGAAGCTCCTGCTGAGCAGCC11.1235955056179776No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT11.1235955056179776No Hit
GCTTTTGGGGGAGGGTGTCCACCAGCTTCTTCAGCTGAGCCCCTGCCTCC11.1235955056179776No Hit
CCTATGCCGAGGCCGCCGCCGCCCCGGCTGCCGCCTCTGGCCCCAACCAG11.1235955056179776No Hit
CTGGGCAACAGAGCAAGAATCTATCTCAAAAAAAAAAAAAAAAAAAAAAA11.1235955056179776No Hit
TGGCTGTAGGGGCGATCTGAGGTGCCATCATCAATGTTCTTCACGATGAC11.1235955056179776No Hit
TATCAACGCAGAGTACATGGGGGAAAGAAAACAAAAGCCCCATGCAACAC11.1235955056179776No Hit
CCCAGGCCGTGGGGGCCGTGAAGGCCCGGAAGGCCCTGCTGCTGTCTCTT11.1235955056179776No Hit
GTAGAATGAAGGCTAGGGTGACTTCATATGAGATTGTTTGGGCTACTGCT11.1235955056179776No Hit
TTTTCGAGATGCTTGTGGTTTATTGAAGAGAGCAAGGCTGGTGGGCGTGG11.1235955056179776No Hit
GGGCTGTGCAGGAGTCCCAGTGCATGCTGGGACTGTTCTTCGGCTTCCTC11.1235955056179776No Hit
TGTCAGAGTAGGCTCTCCACATGTCCCGAGCCCCATCAAAAGCCTCGCCA11.1235955056179776No Hit
GTATCAACGCAGAGTACATGGGAAACACTCTGTGTGGCTCCTCGGCTTTG11.1235955056179776No Hit
CTGCTGCAGCTCCGCTTCTGCAGAGATCTGCCCGAGCTTTCAGCGTGTCA11.1235955056179776No Hit
TCTCAGTGCAGAGGCTCGCGAGCTATAGAAGAATCACCAGCAGCAAGTGT11.1235955056179776No Hit
GCGCCCGTCGGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAG11.1235955056179776No Hit
GAGCTTCAGCGGGTTGAGGGTGCCGAGGGGGTTGGCCAGGGTCCCGGCCC11.1235955056179776No Hit
CTTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTACATT11.1235955056179776No Hit
GTACAGATCAGCACCATGAAGCTTCTCACGGGCCTGGTTTTCTGCTCCTT11.1235955056179776No Hit
CTCCGGGGGCAGATGAAGGTAATCACGGAGATACTGGATACCCTCATTGG11.1235955056179776No Hit
CTCTTGGTCTGCTTGGCCACCCACTCTTTGTCAAAGCTTTGCGGGAGGGG11.1235955056179776No Hit
GCGTGGCCCTGTCCTGCAGCTCCGCTGCTGCTTTCTTAGTGGGCTCGGCC11.1235955056179776No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTAGAGAAA11.1235955056179776No Hit
ACCAAATAATTCAAGCACTGCTTATTACAATTTTACTGGGTCTCTATTTT11.1235955056179776No Hit
CCCTCAACCCGCTGAAGCTCCTGCTGAGCAGCCTGGGCATCCCCGTGAAC11.1235955056179776No Hit
CGGTGGAGTCGCGCGTTACCCAGGAGGAAATTAAGAAGGAGCCAGAGAAA11.1235955056179776No Hit
CCTGCGGAGCCTGCGTCGCGTGCAGGTGACGGCCGCGCTCAGCGCCGACC11.1235955056179776No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)