FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003654270

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003654270
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences89
Sequences flagged as poor quality0
Sequence length100
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCAAGACATGAGGGAGGCAGGGGCTCAGCTGAAGAAGCTGGTGGACAC22.247191011235955No Hit
GAGGCGTAGAGCTCCAGGTTGATCTGGCGGTTGATGGCGGCCTCTGAGTC22.247191011235955No Hit
GGGCATCCCCGTGAACCACCTCATAGAGGGCTCCCAGAAGTGTGTGGCTG22.247191011235955No Hit
ATTAAACTCTGACATCACCTTATCTCTAAACACATAGCCAGCAATGGCTG22.247191011235955No Hit
GCGTGGCCCTGTCCTGCAGCTCCGCTGCTGCTTTCTTAGTGGGCTCGGCC22.247191011235955No Hit
TCTCCACCCTTGGTATTTCTGGTGTAAATTACTTGAGCTCTGTGCTTTGA22.247191011235955No Hit
GCTTATATGGATCGGCGTGACCACCCCTTGCCGGAGGTGGCCCATGTCAA11.1235955056179776No Hit
GGGCTGAGCTCCCCAACCTGTCTGTATTCTGCTCCTTGCTCCACAAATGC11.1235955056179776No Hit
GTGGGGCCCGCGGCGGGATTTTCCCGGGCGGCGAGAGCGGATCTATCTTG11.1235955056179776No Hit
ATGCAGACTTTGAGTCTAACGTGACGGCCACCTTGGCCTCCATCAATAAA11.1235955056179776No Hit
GGTTTATCGATTACAGAACAGGCTCCTCTAGAGGGATATGAAGCACCGCC11.1235955056179776No Hit
CCCTCATGTCTTGATCAGGGCTGAAAAGTTCCATGGCAGCCTCATAACTG11.1235955056179776No Hit
TGCCCAGGCTGCTCAGCAGGAGCTTCAGCGGGTTGAGGGTGCCGAGGGGG11.1235955056179776No Hit
CCCCTAACAGGGGCCCTCTCAGCCCTCCTAATGACCTCCGGCCTAGCCAT11.1235955056179776No Hit
GATCAGCACCATGAAGCTTCTCACGGGCCTGGTTTTCTGCTCCTTGGTCC11.1235955056179776No Hit
CCTTTTGGCAGCATCATAGTTCCCCCGAGCATGGAAGTATTTGTCTGAGC11.1235955056179776No Hit
GTCCAGCATCAGAAGGCAGAGGCAGCATCAGTGACTCCCAGCCATGGAAT11.1235955056179776No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGG11.1235955056179776No Hit
AACTACCACCTACCTCCCCCACCAAAGCCCATAAAAATAAAAAATTATAA11.1235955056179776No Hit
CAGAGAGACTCCTTCAAGGCTGGAGGCTCAGCAAGTGCCATGCTACAGCC11.1235955056179776No Hit
CAGCTGAAGAAGCTGGTGGACACCCTCCCCCAAAAGCCCAGAGAAAGCAT11.1235955056179776No Hit
ATCAACTTTCGATGGTAGTCGCCGTGCCTACCATGGTGACCACGGGTGAC11.1235955056179776No Hit
CTGTAGGCCCGGGTGGTTGCTGCCGAAATGGGCAAGTTCATGAAACCTGG11.1235955056179776No Hit
AGAGGAAGAAGGTGGGGAGGAAGAGGAGGAGGAAGAAGAAGGTGATGGTG11.1235955056179776No Hit
GCTCACCGCCCTCCTGGGGCTCTGCGTGGCCCTGTCCTGCAGCTCCGCTG11.1235955056179776No Hit
GAGTTCCACATGACGACTGAGGCCCAAGCCACCATCCGCATGGACACCAG11.1235955056179776No Hit
GTACATGGGGAGTCCCCTCGCCAGATTCCCTCCGTCGCCGCCAAGATGAT11.1235955056179776No Hit
GACCAAGGATGCCCTTGTGCTTACTCCAGCCTCCTTGTGGAAACCCACCT11.1235955056179776No Hit
CTCCTTCACATGGCAAAGAGGATGAGAAAGGCTACCATCAGACAAAAGAG11.1235955056179776No Hit
GTGCAGTGGCGCGATCTCGGCTCACTGCAACCTTCCGCCTCCCGGGTTCA11.1235955056179776No Hit
CCATGAAACTCGCTGTCACCCTCACCCTGGTCACACTGGCTCTCTGCTGC11.1235955056179776No Hit
TGTCTAAGTACGCACGGCCGGTACAGTGAAACTGCGAATGGCTCATTAAA11.1235955056179776No Hit
CTCCAGCCTGGCGACAGAGTTAGACTCTGTCTCAAAAAAAAAAAAATTAC11.1235955056179776No Hit
CTTATATTCCACAAGGGACTCACAGCCAGCAGGTTAACTCTCCCCTCCCT11.1235955056179776No Hit
CGTTTATTGAGAGGGACCGGGGGAAGGGGATGGACGGTCCTCCCCGCGGC11.1235955056179776No Hit
GCGCTGGAGTCGGCGGCGGAGGCCGGGGCCGGGACCCTGGCCAACCCCCT11.1235955056179776No Hit
TAAATAGGATTATCCCGTATCGAAGGCCTTTTTGGACAGGTGGTGTGTGG11.1235955056179776No Hit
CCTGCGTGGGAGAGGCGAAGGTGAAGGACATCTGGTTGGGGCCAGAGGCG11.1235955056179776No Hit
CCCCCAGCCAAACCACAGCAGTTCAACGCATAGTGGATGGCTTTCAGCGT11.1235955056179776No Hit
GTATCAACGCAGAGTACATGGGATGACCCACCAATCACATGCCTATCATA11.1235955056179776No Hit
CTTCTGGGCCAGGCTCAGTGGCTCATGCCTATATAATCCCAGTACTTTGA11.1235955056179776No Hit
ACCTAGGCCTCCTATTTATTCTAGCCACCTCTAGCCTAGCCGTTTACTCA11.1235955056179776No Hit
AATCAGGACAGAGTAGTTCCAGAGGCAGTTCTCACTGTGACAGCCCTTCG11.1235955056179776No Hit
GTGTTTAAGGGGTTGGCTAGGGTATAATTGTCTGGGTCGCCTAGGAGGTC11.1235955056179776No Hit
GGGCATGATGGTGGTGGGTACGGGCACCTCGCTGGCGCTCTCCTCCCTCC11.1235955056179776No Hit
GATCTGCAACTCGCTGGACGGTACATTTCCCCGGGAGAACTCGTCCATTC11.1235955056179776No Hit
CCATGGATGACAGCGCTGGCCCAAGGTCGCCGACAGGAGAATGGCTGCCG11.1235955056179776No Hit
ATTGAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGGCA11.1235955056179776No Hit
GTCTTGTCCTCAGGTGTAGATGCTCCAGTCTCGGCTCAGCCAAACACTGT11.1235955056179776No Hit
GCCGGGGACAGCGAGGCCGGGCGGCGGGAGGGTCCCAGCTGGCGCAGGCA11.1235955056179776No Hit
TACCAGGGGCTCGTGCACAAAGGTGTTCACTGGTTTGCACCGCCCCTGTG11.1235955056179776No Hit
GTCCCGCACAGCACGGTGCGCGAGCGCAGGTTGTACTCAGCGGGGTCCCC11.1235955056179776No Hit
GGGCATGCAGAGCCCCCAACAGGGCTAGGCCCAGCCACAGGAGACCTAGG11.1235955056179776No Hit
CAACAGTGGTCCCCGGGAGGACTCCACACGCATTGGGCGCGCCGGGACAG11.1235955056179776No Hit
TCCTGGGGCTCTGCGTGGCCCTGTCCTGCAGCTCCGCTGCTGCTTTCTTA11.1235955056179776No Hit
CGGCCCCCACGGCCTGGGGACCCAGCTCAGCCACACACTTCTGGGAGCCC11.1235955056179776No Hit
CCGCTACACCATCCATAGCCAGCTGGAGCACCTGCAGTCCAAGTACATCG11.1235955056179776No Hit
GGTGGAAGGTGTTGATGATGGTCTCTATGTTGCGTTCCAGCTGCGACATT11.1235955056179776No Hit
CATGGGAGCCGCAGGTTCCCCGCGCGCCCCGAGCCCCCGCGCCATGAAGC11.1235955056179776No Hit
CTCTAGCCTGGATGACAGACTCCATCTAAAAAAAAAAAAAAAAAAAAAAA11.1235955056179776No Hit
GGGTTGACCTGGGGACCTCCCGGGGGTCCCCCCGCCGCCGCCGCAGCCTC11.1235955056179776No Hit
CAGTTTGCCTGGAGACATTTCTACTGGTACCTTACCAATGAGGGTATCCA11.1235955056179776No Hit
ACATGAATTTTCCTGGTTGACATTGATTTCAAAGGGTTTTATGCATTAAA11.1235955056179776No Hit
CACTGGCTCTCTGCTGCAGCTCCGCTTCTGCAGAGATCTGCCCGAGCTTT11.1235955056179776No Hit
CAGCAGGGCCTTCCGGGCCTTCACGGCCCCCACGGCCTGGGCTGTCTCTT11.1235955056179776No Hit
GGCCTGGGGACCCAGCTCAGCCACACACTTCTGGGAGCCCTCTATGAGGT11.1235955056179776No Hit
AGGAGTCTGTGGTGGGCTCCGGACCAATCCTCATGCCTGGGAAATCCTGC11.1235955056179776No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT11.1235955056179776No Hit
CCCGGAACGTGTTGCATGGGGCTTTTGTTTTCTTTCCCCCATGTACTCTG11.1235955056179776No Hit
GAGTGAGTGTTCAAGTCTTCGGAGTTTGGGTTTGCTTGTCCAGGTGGTCC11.1235955056179776No Hit
CCTTAGGAGGACTTTGGTAATTGGTTTTATGCATTGATGGTTTTTTTTTT11.1235955056179776No Hit
CCTCATTCTAACCTGAATCGGAGGACAACCAGTAAGCTACCCTTTTACCA11.1235955056179776No Hit
TGATACACGAGGCTCAGCAGGCCATGGACATCCACTTCCATAGCCCGGCC11.1235955056179776No Hit
TCGTCATCCCAGTGCTGATCTTCCAGGCCTATGGATAGATCAGGAGGCAT11.1235955056179776No Hit
TATCGTACACGCCGAAGTAGGCCGCCCGGTAGATGATGATGCCCTGCACG11.1235955056179776No Hit
GGTCACACTGGCTCTCTGCTGCAGCTCCGCTTCTGCAGAGATCTGCCCGA11.1235955056179776No Hit
CTGCATCTCCACGCTCAGAGAAATACTTAGAGATTTGAGTGTGGAAGCCT11.1235955056179776No Hit
CATCTACAAAATGCCAGTATCAGGCGGCGGCTTCGAAGCCAAAGTGATGT11.1235955056179776No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATA11.1235955056179776No Hit
CCGCGGGGAGGACCGTCCATCCCCTTCCCCCGGCCCCGCTCAATAAACGT11.1235955056179776No Hit
CATGGGATACTAGCCCACCAGACTCAGAGACGGAACCAGAGACAGGCCAG11.1235955056179776No Hit
CATCCTCCGGAGCTCGCGGCCATAGCGCTGTGCTGCCCAGAGGTTGGGGG11.1235955056179776No Hit
GTATCAACGCAGAGTACATGGGAGTACATGGGAGAAGTGTTTGATCACAT11.1235955056179776No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)