FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003654271

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003654271
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68
Sequences flagged as poor quality0
Sequence length100
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGTGGCACTGGTGGGTGGAATGACATTGTTGACAAAGAAAAACAAGGCA22.941176470588235No Hit
CCATGCCTGCTTGTCGCCTAGGCCCGCTAGCCGCCGCCCTCCTCCTCAGC22.941176470588235No Hit
CCCCAGCAGGGCCTCAGGGCCTTCACGGCCCCCACGGCCTGGGGACCCAG22.941176470588235No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTAT11.4705882352941175No Hit
CTTCCCCGGGTCCCTGGCCTTTGGCCAACTCTGCCGCCTTCTTCTCCCGC11.4705882352941175No Hit
TGCCCAGGCTGCTCAGCAGGAGCTTCAGCGGGTTGAGGGTGCCGAGGGGG11.4705882352941175No Hit
CTATGAGGTGGTTCACGGGGATGCCCAGGCTGCTCAGCAGGAGCTTCAGC11.4705882352941175No Hit
CCCTTAGCCAGCCAGATGCGCCTGTGAACCAAAGCTTCGTGCACATGTGT11.4705882352941175No Hit
GCCGGGACCCTGGCCAACCCCCTCGGCACCCTCAACCCGCTGAAGCTCCT11.4705882352941175No Hit
CCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAG11.4705882352941175No Hit
GCTCCCTCTTTGACCTCTCAGTGCTCAAGCTCCACCACAGCCTGCAGCAG11.4705882352941175No Hit
CCCACTACACACACACACACACACACACACACACACCTGTCTCTTATACA11.4705882352941175No Hit
ACCTCATAGAGGGCTCCCAGAAGTGTGTGGCTGAGCTGGGTCCCCAGGCC11.4705882352941175No Hit
GGGTTTGGCCATTCTTTTATCTTGGGTCCATGTGAGTGACAGAAATGGTG11.4705882352941175No Hit
ACTTCCTACCCAGTGAAAGAATTCGTTCTCCATGTTTCTAAAACGGACAC11.4705882352941175No Hit
GTTCTTGCATAGGCCCAACGAAGCAAGGCAGGATTTTCGATGAGCCCTCG11.4705882352941175No Hit
TTTCTGGGTTAGTCTCAGCCTCTCCCCCATGTACCTGTCTCTTATACACA11.4705882352941175No Hit
CCTGGATACCGCAGCTAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGT11.4705882352941175No Hit
GGTGTATACTCCATCTCCTTCTGTGCGCAGTTTGTAGTAGTTCTTACACT11.4705882352941175No Hit
GGTAATATGTTATCATCAGTATTTCCAGGTAACTGTTCACACTCAAGTAG11.4705882352941175No Hit
CCGACGCCGACTCCAGCGCAGCGACAGGCTGGGCCACAGGCTTGGCCGAG11.4705882352941175No Hit
CCCTCTCAGCCCTCCTAATGACCTCCGGCCTAGCCATGTGATTTCACTTC11.4705882352941175No Hit
CCCCGAGGGCCTGGCAGGTGGTGTGGGCATCCCAGCCCCTGGGCACCAGG11.4705882352941175No Hit
GTCCTTTAGTGTTGTGTATGGTTATCATTTGTTTTGAGGTTAGTTTGATT11.4705882352941175No Hit
ATACTAGGCCTACTAACCAACACACTAACCATATACCCTGTCTCTTATAC11.4705882352941175No Hit
GGTGTAGATGCTCCAGTCTCGGCTCAGCCAAACACTGTCAGGGCCCCCAG11.4705882352941175No Hit
CTACCTCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTT11.4705882352941175No Hit
CCCCCCACCCCCGCCCCTGGGCTACCATCTGCATGGGGCTGGGGTCCTCC11.4705882352941175No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGA11.4705882352941175No Hit
GTTCAACACCCTCTTCTTGAACTGGTGCTGTCTGGGCTTCATAGCATTCG11.4705882352941175No Hit
CTGCAGGGCCACTCTTGGCAGAGACTTTGGGTTTGTAGGGGTCCTCAAGT11.4705882352941175No Hit
GAACTCTTCAAACTCGTCGTCTTCCTCTAACAGACCTAAGTCTACCGGCT11.4705882352941175No Hit
GTTGGGGATCTTCAGCTTCTAAATGCTAATTACACAGTGAGCTTTGGGCT11.4705882352941175No Hit
TCACTGGGATGCCCAGGCTGCTCAGCAGGAGCTTCAGCGGGTTGAGGGTG11.4705882352941175No Hit
GTATCAACGCAGAGTACATGGGAGCCCACCAGACTCAGAGACGGAACCAG11.4705882352941175No Hit
GCCTGGGCATCCCCGTGAACCACCTCATAGAGGGCTCCCAGAAGTGTGTG11.4705882352941175No Hit
GGCGTGGACTCAAAGCATGGCAGCGGCAGAGGCTGGAGCAGTTGGGGATC11.4705882352941175No Hit
TCCTGGGGCTCTGCGTGGCCCTGTCCTGCAGCTCCGCTGCTGCTTTCTTA11.4705882352941175No Hit
CTGCGTGGCCCTGTCCTGCAGCTCCGCTGCTGCTTTCTTAGTGGGCTCGG11.4705882352941175No Hit
GGCTGGGCCACAGGCTTGGCCGAGCCCACTAAGAACTGTCTCTTATACAC11.4705882352941175No Hit
CAGCAGCACCAGCGGTGGCAGAGACCCCAGACATCAAGCTCTTTGGGAAG11.4705882352941175No Hit
CTCCCACCCTGTACCTCATCCCATGAGACCCTGGTGCCTGGCTCTTTCGT11.4705882352941175No Hit
CCGAGATCTACACTTTTTTTTTCGTCGGCAGCGTCAAAAAAAAAAAAAAA11.4705882352941175No Hit
GAAGAGAGCAAGGCTGGTGGGCGTGGACTCAAAGCATGGCAGCGGCAGAG11.4705882352941175No Hit
GTGTAGAGGGAAGGTTAATGGTTGATATTGCTAGGGTGGCGCTTCCAATT11.4705882352941175No Hit
GTCCTGCAGCTCCGCTGCTGCTTTCTTAGTGGGCTCGGCCAAGCCTGTGG11.4705882352941175No Hit
GTTGTAGTGAGCTGAGATCACACCACTGTACTCCAGCCTGGGTGACAGAG11.4705882352941175No Hit
GGCGCTATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCATGCCATTC11.4705882352941175No Hit
CACCAGCTGCAGGAGGTCTGCATACATGCCATTGAAGGAAGCCTCGATCA11.4705882352941175No Hit
CTATAGAGCTCACACCCATACTCCCAGCTGGGACCCAGCCTTCCCTGATG11.4705882352941175No Hit
AGCTAGGACTGGGAGAGATAGGAGAAGTAGGACTGCTGTGATTAGGACGG11.4705882352941175No Hit
TCCCAGGCCAGCGTCCACCACAACTCAAAGACAGCGGGGGGACTGCACCA11.4705882352941175No Hit
CTTCAGGGCCTTCACGGCCCCCACGGCCTGGGGACCCAGCTCAGCCACAC11.4705882352941175No Hit
ATGGATTGGATCTGCTGTTTCAGCTGCGAGCCTTCTTTGATGGTGACAGA11.4705882352941175No Hit
GTCCTCCCCGCGGCGGGGTTTTCAGCCCTCGCGGGTGGGCAGCGTCTTGT11.4705882352941175No Hit
GTCCTGCACCACCCCGCACCTCCACTCCATCCTGAAGGCTACCAACTACA11.4705882352941175No Hit
GCCCTGTCCTGCAGCTCCGCTGCTGCTTTCTTAGTGGGCTCGGCCAAGCC11.4705882352941175No Hit
GGCCCAGCCTGTCGCTGCGCTGGAGTCGGCGGCGGAGGCCGGGGCCGGGA11.4705882352941175No Hit
TGCTGGGCCTGCTCTTCCTTGGGGCCGGGCTGTTCATCTACTTCAGGAAT11.4705882352941175No Hit
CCTAATGACCTCCGGCCTAGCCATGTGATTTCACTTCCACTCCATAACGC11.4705882352941175No Hit
TATAAGGGCAGGGCCTCCTTCAGGAACAGCCACCAGTGAGCTTCCTCCTC11.4705882352941175No Hit
GCTTTATTCAACAGAACAAAAGAAGGCAAAGAGAGCAGAGAAAGCAGTGC11.4705882352941175No Hit
AGCAAGGACAGCTTTGCAGTTCTCCTGGAGTTCGCTGAGGAGCAGCTGCG11.4705882352941175No Hit
CTGTATTCCCTCTTGGGCTGACCACAGCTTCTCCCTTTCCCAAACAATAA11.4705882352941175No Hit
TGATCTAATTGACGGTGTGGGGTTGCATGCCCAAATAAGGCGCTGCTGGT11.4705882352941175No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)