FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003654272

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003654272
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68
Sequences flagged as poor quality0
Sequence length100
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCATCCCCGTGAACCACCTCATAGAGGGCTCCCAGAAGTGTGTGGCTG22.941176470588235No Hit
GAGAAGCGCCGCTCTGAGGGCGAGAAGATCCGAAAGAAATACCCGGACCG22.941176470588235No Hit
AGGTGGCACAGCCCGCGCTGCAGCACTTGAGGTTGTCGGCGCATTCGCTG22.941176470588235No Hit
TTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTGGTGCATGGCC11.4705882352941175No Hit
GAGGAGCGTTATGGAGTGGAAGTGAAATCACATGGCTAGGCCGGAGGTCA11.4705882352941175No Hit
ACCTTTAGGGGAACACATGTGCACGAAGCTTTGGTTCACAGGCGCATCTG11.4705882352941175No Hit
GGTGTGCCGCGTGGTACCTCTGGTGGCGGGCGGCATCTGCCAGTGCCTGG11.4705882352941175No Hit
GCTTTCTTAGTGGGCTCGGCCAAGCCTGTGGCCCAGCCTGTCGCTGCGCT11.4705882352941175No Hit
CCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCG11.4705882352941175No Hit
GCCCCGAGGCGGCCCTACTCCTCCTCCTCTCCCGAAGACTCTCTCTCGAA11.4705882352941175No Hit
TATCAACGCAGAGTACATGGGACAGAGCCCGGGCCGCAGGCACCTCCTCG11.4705882352941175No Hit
GGTATATGGTTAGTGTGTTGGTTAGTAGGCCTAGTATCTGTCTCTTATAC11.4705882352941175No Hit
CCCCCGGCCCCTCTCAATAAACGTGGTTAAGACCAAAAAAAAAAAAAAAA11.4705882352941175No Hit
GATCAAGACATGAGGGAGGCAGGGGCTCAGCTGAAGAAGCTGGTGGACAC11.4705882352941175No Hit
CTCAGGCTACATCCGTTCTAGTGGGTGTGTTTGAAGGTAGACATTGGGAA11.4705882352941175No Hit
GATTATAGGCTTTCGCTCTAAGATTAAAAATGCCCTAGCCCACTTCTTAC11.4705882352941175No Hit
GATCCTAACTCAGGACACTCCCGAGTTTTTTATAGACCAAGGCCATGCCA11.4705882352941175No Hit
GCTCTTAACCACGTTTATTGAGAGGGGCCGGGGGAAGGGGATGGACGGTC11.4705882352941175No Hit
GTACATGGGGGAGAGGCTGAGACTAACCCAGAAACTGTCTCTTATACACA11.4705882352941175No Hit
GGACGCTGTTCCTCTCGCTGTCTCGTCCTCTCCCTCGAGTTTGAGACGTG11.4705882352941175No Hit
CCAGCTCATAGAGGGCTCCCAGAAGTGTGTGGCTGAGCTGGGTCCCCAGG11.4705882352941175No Hit
GAGTGAGATTCCTTCACAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAA11.4705882352941175No Hit
CTTCTGGGAGCCCTCTATGAGGTGGTTCACGGGGATGCCCAGGCTGCTCA11.4705882352941175No Hit
TTATTGGTTGGGAAAGGGAGAAGCTGTGGTCAGCCCAAGAGGGAATACAG11.4705882352941175No Hit
CCTCCCCGCGGCGGGGTTTTCAGCCCTCGCGGGTGGGCAGCGTCTTGTCC11.4705882352941175No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA11.4705882352941175No Hit
GGTTCCCCGCGCGCCCCGAGCCCCCGCGCCATGAAGCTCGCCGCCCTCCT11.4705882352941175No Hit
GTCTTGTCCTCAGGTGTAGATGCTCCAGTCTCGGCTCAGCCAAACACTGT11.4705882352941175No Hit
CACCGGGGGGCTCCCAGCCCGTGCACCCTGGAAGGGCAGGTCTGGTGGCT11.4705882352941175No Hit
CCCTCTATGAGGTGGTTCACGGGGATGCCCAGGCTGCTCAGCAGGAGCTT11.4705882352941175No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTA11.4705882352941175No Hit
GTCACGGATATCGCAGATGACGACTGCCCGAAGCCCCCCGAGATTGCACA11.4705882352941175No Hit
AGGCGGTAGTGACGGTGGCGTTTCCTTGAGGAAGAGTGAGGGTTCCAACT11.4705882352941175No Hit
GCTGCGGGACTACTGCGCCCACCACCTCATCCGGCTGCTCAAGTGCAAGC11.4705882352941175No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTACGCTG11.4705882352941175No Hit
TCATAGGGCAGCTCGTCCTCTGTGAACTCCGTGAACTCTGACTCTGTGTC11.4705882352941175No Hit
ATTCAACACGCCCCTGGTCAAGACCATCGTGGAGTTCCACATGACGACTG11.4705882352941175No Hit
TCCTGGGGCTCTGCGTGGCCCTGTCCTGCAGCTCCGCTGCTGCTTTCTTA11.4705882352941175No Hit
CAGCTATTCAGGAGGCTGAGGCAGGAGAATGGCATGAACCCGGGAGGCGG11.4705882352941175No Hit
CTCTACAAGAGCCCCTGCCCCTCTGTTGGAGGCACAGTTTTAGAATAAGG11.4705882352941175No Hit
CATGGGAGCCGCAGGTTCCCCGCGCGCCCCGAGCCCCCGCGCCATGAAGC11.4705882352941175No Hit
ATGGTAGACTGTCACAGAGCCGAATACCAGTAACAGGATGAATCCAATGG11.4705882352941175No Hit
TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCA11.4705882352941175No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGA11.4705882352941175No Hit
AGTCCAGAGTGTCCTTTCTGATTCCTGAAGTAGATGAACAGCCCGGCCCC11.4705882352941175No Hit
CTTCTCTTGCAGTGTCCCTGAATGGCAAGTGATGTACCTTCTGATGCAGT11.4705882352941175No Hit
GGTTCACGGGGATGCCCGGGCTGCTCAGCAGGAGCTTCAGCGGGTTGAGG11.4705882352941175No Hit
TTCTTAGTGGGCTCGGCCAAGCCTGTGGCCCAGCCTGTCGCTGCGCTGGA11.4705882352941175No Hit
GAACTTTTCAGCCCTGATCAAGACATGAGGGAGGCAGGGGCTCAGCTGAA11.4705882352941175No Hit
GCCTGAGACCCTCGACCCAGCCGAATACAACATATCTCCGGAAACCCGGC11.4705882352941175No Hit
GTACTGATCATTCTATTTCCCCCTCTATTGATCCCCACCTCCAAATATCT11.4705882352941175No Hit
GGCCCAGCCTGTCGCTGCGCTGGAGTCGGCGGCGGAGGCCGGGGCCGGGA11.4705882352941175No Hit
TTTTTGGACAGGTGGTGTGTGGTGGCCTTGGTATGTGCTTTCTCGTGTTA11.4705882352941175No Hit
AGTCAGTTCGCTGCTATTCCCATGGGTCACAGGAGACAGATGAGGAGTTT11.4705882352941175No Hit
CTCCAGTCTCGGCTCAGCCAAACACTGTCAGGGCCCCCAGCAGGGCCTTC11.4705882352941175No Hit
ACCCTCAACAGGGGCATCTCTGAGTTCATCGTGATGGCTGCAGACGCCGA11.4705882352941175No Hit
GGGTTATCCCTTCTCCCTGTGCCTTCCCATCTCGTCCATGAGCCTAGGTC11.4705882352941175No Hit
CCATGGAACTTTTCAGCCCTGATCAAGACATGAGGGAGGCAGGGGCTCAG11.4705882352941175No Hit
ACTGGGGGCTGCAGGTGGGCTAGGCACAGGTGGCAGGGCAGCCGCGGGTG11.4705882352941175No Hit
ATCTTAGGGGCCATCAATTTCATCACAACAATTATCAATATAAAACCCCC11.4705882352941175No Hit
CTGGAGGGTGTGTCCATGAGGAGGGTTTCGATGACACGCTGAAAGCTCGG11.4705882352941175No Hit
GCTTGACGATGCGCACAGTCATGAGCTTCTTGCCGTTGTTGCGGCCGTGC11.4705882352941175No Hit
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTGGGCTGTCTCTTATACA11.4705882352941175No Hit
TTCTTAGTGGGCTCGGCCAAGCCTGTGGCCCAGCCCTGTCTCTTATACAC11.4705882352941175No Hit
TCTATGAGGTGGTTCACGGGGATGCCCAGGCTGCTCAGCAGGAGCTTCAG11.4705882352941175No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)