FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003654468

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003654468
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12
Sequences flagged as poor quality0
Sequence length100
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTTCGAGCTGGCGAAGCGGCCGGCGTGGATGCTGTCAGGCGAGCAACT433.33333333333333No Hit
TATGATATATTACCAAAACTTCCTTCCTGTAAAACAGTAGTAGCTGAGAT18.333333333333332No Hit
GGCTGGACCCAGGCCAACCTGCTGGTTCTGCCCCGCGAGCTGGCCTACGA18.333333333333332No Hit
GGTCGACCTCGGTCCTGAGCAGTCTGATACCGAAGACGAGGTTGACGCTG18.333333333333332No Hit
GCTTGACACCACCGAAAACCTCGGCGACATCGCCGTCGAGGCTGCGGTCA18.333333333333332No Hit
GCTCCGCATGGGTGTGTCCACATCCACGAGGACTCGTGATCGGACTCCTG18.333333333333332No Hit
GACAAGGACTTCAAGACCGCCGGACAGGTGATCGATGCCTCCAACAAGCT18.333333333333332No Hit
TCTACCACACGGTTCAGCTATGTCTCCTGTCCATCTTCCTTTACGCTACT18.333333333333332No Hit
ACCTGTTGCTGAACCTGAAGGGCGTGGTGTTTAAGCTGCACAACCGTGAT18.333333333333332No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)