FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003655565

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003655565
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences122
Sequences flagged as poor quality0
Sequence length100
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGTCGATGAAGCGCCCGGCCTTCGAAGACCGCACCTTGGCGCGCATCA43.278688524590164No Hit
CCGAAGACCAGCTGGCCGCCCAGGCGCGCCTGACACGCGACCTGCAGGAC32.459016393442623No Hit
TACCGCGCAACACCCGCGGTGAAGCTGTCCGGATCCATGGCCAATACCTG21.639344262295082No Hit
GTGCCTGTATTGCGTGGTCGCGCACGGCGCCATCCTGCGCATTTACGAGA21.639344262295082No Hit
TTTCATTTCCATTCAATGAGGATTCCATTCGGTTCCATTTGATGATGATT21.639344262295082No Hit
GCCGCGTTGAGGGCACGGCTCAAGCAGGTCGTGGATGCGGGCGGTGAGGG21.639344262295082No Hit
CTATTCGATGATCCACTTGATTCCATTTGGCGATGATTCCATTCGTGTCC21.639344262295082No Hit
CTGGATACCAGCACGGCCCAGATGCCGTTGTTGACGATCCAGGACACCAG21.639344262295082No Hit
GTTCTACGACGACAACCGGATCACCATCGAAGGTGATACCGCCATCGCCT21.639344262295082No Hit
ACCGCAGCCAGTTCGATGCGCAGGCCGTCAAGCGTCAGCTCGGGATCGCA21.639344262295082No Hit
CCTGACTGTCTACTGTTTCCCTTTTCAGCACCTATCATGTCTTCAAATGA21.639344262295082No Hit
CTCATATCCAGGGTGTGCTGATGCAAGAGGTGGCTCCCACCATCTTGCAC21.639344262295082No Hit
CAACAACGGCCAGGCCATCACCTTGTCTCGCAAGCTCGCGGATGCGGGCG21.639344262295082No Hit
GTATTGGGCGAAGGCCAGCGTCGTCAGGAAGGGTCCGGTGAAGCTCTTGG21.639344262295082No Hit
CCCCGACGCCCGCCGAACTGGAAAACGCCAAGGCCCGCTTCCTCGGCAAG21.639344262295082No Hit
CTGATAACACATTAATCATCTCTGGTAACTTTTCTTGCATATATGAGATT21.639344262295082No Hit
AAGCTGCGTTTCGGGGTGATGTTTTCCGGGCGAATATCATTGCGCCGGTG21.639344262295082No Hit
GCGCCGCTCTCGGCCACGGTGAGCCCGCCATCGGTGATGACCGGGCTCTT21.639344262295082No Hit
GTGGTGCGCTCTGGACGGGGTTGTGCATTCTCGCCGCGCCCGGGCGGACG21.639344262295082No Hit
CCGCTGCACTGGTCTCCATATTCCAGAGCAGAAAAACCCGTTTGCTATTG21.639344262295082No Hit
ACGTTGGCCTGATCGGCCGCGTCCCGGGCCGTGACCAGTTCCTCGAGGGT21.639344262295082No Hit
GGCATACAGGACATGTTCCTCAACGGGTTCTGCTTCCTCCACCAGTTCAA21.639344262295082No Hit
ATGGTCGCACGCAATGGAATGTACCCCCGGGCCAGGTCATTGCAATGGGC10.819672131147541No Hit
GTTTGACAGGGCGGCGCATGGTATCTGAACGGTGGGCCTGGCAGTTGAAA10.819672131147541No Hit
GCCGATCACCAGTTCCGGGCGGACGTCGTACACCTCTTCGTCGACGATGT10.819672131147541No Hit
GCATGAGCGGCTGACAGGGCACGGGGAGAAAACGATTAGCTTCTCCCAGG10.819672131147541No Hit
GAATCCCCCTCATGACGACTGTCGTCGGCTAACTGACTGCGCGCATGCGT10.819672131147541No Hit
GCCTCGGGCCTCTCAAAGTGCTGGGATTACAGGTGTGAGCCACAGCACCT10.819672131147541No Hit
CAGGGAATCAGGCCTTGGAACTCTCTGGGCAAAAGCCATAATACCACTTG10.819672131147541No Hit
GATATCCGACCTTCACATCAAGCCGCCGGGAGCGTTGGCCTATGGCCGGG10.819672131147541No Hit
GATACTGCCGCCATGCCGGACTGCGCCGGCGGCGGCAGCCGGGCGAACGC10.819672131147541No Hit
GGGCATATGTTCATTATGTGGCAGCCATAACTAACTACCACAAACTGGGT10.819672131147541No Hit
CCCACCACCAGCCCAGCTCGGCGGTCGGACGCAGGAAGCGTTCGCGTTGC10.819672131147541No Hit
GGCACCGACGATGAACGGCAGCACCGTTCCGAGCAGCAGCGAGATGGCGC10.819672131147541No Hit
GGGTGGTGGTGGCCTCATATTGCCCATGCCGCAGGCCAGTCCTCGATCAC10.819672131147541No Hit
GGAAGATGAGGCGGGAGGATCGCTTGAGCCCAAGAGGCGGAGGTTGCAGT10.819672131147541No Hit
ATCCATGACAGCCGTCTCACCCCTGTCACCCGAGACCGAGGGCTCGGCAG10.819672131147541No Hit
CATCGACGGCAACGAGCTGGGCAAGCTCTTCACCAAGGGCATTGAGGCCA10.819672131147541No Hit
GGGCAGTACCAGCCACACTGGGTTTACTCATTTGCATAGTCCTACCATGG10.819672131147541No Hit
CAGCCCTTGGTGCTTAAGGCTGGGAGTGCCTGAGTCTAGCTCTTTCTCTC10.819672131147541No Hit
CCATGTGTGTGCATGTGTCTCTGTGTGTGTGTGTCCCTGTGCGTGCAGCG10.819672131147541No Hit
CGCCCACGATGAGCATCGGCGGAAAGCGGGCTAATCGATACACCGGCCCC10.819672131147541No Hit
TCAACGGAGAGTCCCCATGTGCGGCATCGTCGGCGCGGTCAGTCAGCGCA10.819672131147541No Hit
AGTTGAAACTGTGATGTCTGTAATGTGATCCACATTTGATGAAATGGCTT10.819672131147541No Hit
GTATATGAACTCATGGCTTGATATTTTTCTGTGAAAGTCCTACAGCCTTA10.819672131147541No Hit
GCTCGGCTGCGTGGGTGATGACGCGTACGGCACCGCGCTGCGCGACGGCC10.819672131147541No Hit
CACCAAGGCCATGGCCTCGCTGCGCAACTTCATGGCCGGCAACGGTTTCA10.819672131147541No Hit
CCCACTCTCTTCTGGCTTGTAGAGCTTCTGCCAAGAGATCCGCTGTTAGT10.819672131147541No Hit
TCACGGCATCAACACCCTGGGCTTGCTGCTGGGCCTGCTCGTCTTTCCCG10.819672131147541No Hit
TGTTGAGATCGTGCGCCAGAAGTTGCTTCAAGCGCGCATGCTTCTGGCCT10.819672131147541No Hit
GCGGACGGGCGATCGCGGCCGGCATCCATGCGGGGACCGTGAACATCAAC10.819672131147541No Hit
CCCCGGAACGTCCCGATCGCCATGAAGGAGACGACAGCGCTGATACGGAG10.819672131147541No Hit
AGAAATGATTGATGATGGTTGTCTCAGCAACGTAGACAAAATTTATGGTA10.819672131147541No Hit
CAGGTGGACCCGGCCACCGCGGGCGCCAGCGTGCCGCCGATGCTGTTGCA10.819672131147541No Hit
GACAACGTAAGTTTTGCCGTGCGCCGCGGCGAGATTCTCGGCATTGCGGG10.819672131147541No Hit
CTCTTCTGGTTTGTCATGTTTCTACTGAATATTCTGCTGTTAGCCTGATC10.819672131147541No Hit
CCGGCGGCGCGCGCGCGATGCTGCTCGGCGGCGACAAGATCGACGGCGAG10.819672131147541No Hit
TCTTTAAGGTTTGAGTTTTGTGATTTCTCTAACTGCCTTATAAAACAACA10.819672131147541No Hit
GGCATGGAGCGCGCGGACCTGCTGTCGGCCAACGCCCAGATCTTCACGGC10.819672131147541No Hit
GTATTACAAGAAGATGTGTTTGGTTTGGAGAGAGGGATGGGGGCAGGTAG10.819672131147541No Hit
TTAGTATTGAAGGCGCATTAGTTTGCTTGGGCTGCCGTAATAAAATATCA10.819672131147541No Hit
CTGTAGACGGGCGCGCTGTTGCTGATGTCGGTGGTGGCCGGCATGGAAAG10.819672131147541No Hit
GATCTTCGGACCCTGCAGGTCGGCCATGATGGCCACCTCGCGGCCCACCG10.819672131147541No Hit
ATACAAACTGTAATCCAAAGTTGTCTTACTTGCTTGAAAAATAATTCAAA10.819672131147541No Hit
GACCTCCGGGGTACGAATAGGGTTGTGATGATGACCTGACCCCCACCCAC10.819672131147541No Hit
GACCAGTCCACGGTGATGTTCTGGCGTAGGTTCTCGGTCAGTTCGTGCGC10.819672131147541No Hit
CACCCGGAGTGGTTTTGAGAGACTGGGAATCGCCAAACCCCCTGTCCAAA10.819672131147541No Hit
CACATAATCTGCCTCATCAGCAGTCTCCCTTCCCTGGATCTCTTCTGACA10.819672131147541No Hit
CTGGGGCTTTTTGCCATTATCATGAGAAGAACATGCCCTGGCCGGCCTAC10.819672131147541No Hit
ACGTGAAGCAGTGCGTCGCCGTATCGAAGAAGAAAAACGTCGCAAAGAAG10.819672131147541No Hit
CCACCCTCCCGCTACTTCTAAAGTCCGACTTCCCCGCGATACGCCGGCAG10.819672131147541No Hit
AATCTTTGCCTGTGGCTCTTTCTGCTCTGACTTTCTAAATCCCCTTGTAG10.819672131147541No Hit
GTTTGCGGCAGTCGGCGACCGCGGTGATCCCGGCCTGCAGCTTCCGGAGC10.819672131147541No Hit
GTCTACGTCTTTCTTGGTAGGGAGAAAACCATTTTTCAGGGTAATAATTT10.819672131147541No Hit
CCTGCAAAACTGCTCCCGTACCTGCCTGGCTGCAGGAACCTTTCTAAAGA10.819672131147541No Hit
CTCAGGATGAGATCACCGCAGAAGACTGCGAGCAGATGGGACGAAAACAA10.819672131147541No Hit
CTCAGATTTTAGTCTCTGAATTCCATTTTCTTTTAAAAGAAACTAGAGCT10.819672131147541No Hit
CTATATGGACGGGCTCGATAATTGGTCGCAAATGTCTGTGTACATTATCC10.819672131147541No Hit
TCGTTGGCCTTGTATGTTTCAGCCACCCTCATGACGACGATCGCTAACGC10.819672131147541No Hit
GCTACCAGCTTCAGCAGCTTTCTGAATACGATTACGGCTAGAATTAGGCA10.819672131147541No Hit
TGAATGCAAACATCACATAGCAGTGTTTGAGAATTCTTCTATCTAGAGTA10.819672131147541No Hit
CTATGGGGCGGCCTGCTGCGCAGTGCCTCAGACACGCAGGTGGCGGTGCT10.819672131147541No Hit
CCCCTGCCTCTGGGCTTTACTCACTCTGTTCCCCCTCCTGGCCTGCCCTT10.819672131147541No Hit
TTTTCCCTCTTACTTGTGAATTTTTCTGGCCACGCGCAACTTAGCTGAGT10.819672131147541No Hit
GAACAGGCGCACGCCGGCATCGGCCTCCAGGTTCTGGATCAGCGCGCTGA10.819672131147541No Hit
CACTAATCATATCCTGAGCACGGGTGAGTGTGTGCTGAGCCTCCTCCCAC10.819672131147541No Hit
TTTCTCACCTGGAGAAATGGCATAAGGATACTATTAAGAAGTCAAATATT10.819672131147541No Hit
CTTGGAATACTGTTCGATCTGGTTGCGTTCCTCTTTTTTTTGCCCCGTCA10.819672131147541No Hit
CTTAATGGGTGCGGAAGTGATCCCGGTGCATAGCGGTTCCGCGACGCTGA10.819672131147541No Hit
GATGAATCAACATCAACACCTATAGCCTCTGTAATAATATTCTTTGCACC10.819672131147541No Hit
GTTAACTGGAGAGCCTCCCCAAGATAAGGGGCTCACAGTTCGCCACCACT10.819672131147541No Hit
TCCACAGCCTCTAATTCAATCAGGATCTTGACGATCGAGTTTGGGTCAAA10.819672131147541No Hit
TTTCTCACCTGGAGAAATGGCATAAGGAGCCTATTAAGAAGTCACTGAGT10.819672131147541No Hit
GTTTGCCGTCATCCCGACGATCACGGCATTCGTCGAGGGTGGATCCTCGA10.819672131147541No Hit
GGCAGCAGTGCCTCTTCCAGGGAGCTGAACTGAGATGGGAGGAAGGCTGA10.819672131147541No Hit
CTTAATACACACACAAATACACATGCTCACGCATGCATGCACATGTGTGT10.819672131147541No Hit
CCGTTAAAGCAAAAACAGTATCTTAGTTCTCAATTGGTTTCACATGTTGG10.819672131147541No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)