FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003655566

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003655566
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences122
Sequences flagged as poor quality0
Sequence length100
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGTCAGCCAGTCCAGCAGGTACTGGAAGTCTTCCTCGGTTTCGCCCGGG43.278688524590164No Hit
GGCCGTGCGGGTGGCCGCATCCTCGATGCCGTGGGTGATGCAGTTGCGCA32.459016393442623No Hit
GTGCCCGCGGCAGAGGCCAGCGTCGCCCCTTTGCCGCGACCGGCATACAG21.639344262295082No Hit
GATGGCCCCAGGGCTCACCGACGCAGAAGCCGTCCATGTTGCCCACCCGC21.639344262295082No Hit
GTTCGGGCGGCTTCTTGTACCCGACGAGCCCGCGGCCCAGGGCTGACGGT21.639344262295082No Hit
TGTCTGTACGGGGCGACGGTGTACGGGTGGATCTGGATGCGCCGCCGGCT21.639344262295082No Hit
GAGGCACTGCTTAATGGAACTGTGAGAAAAGGGTCACCATCCTCCAGACC21.639344262295082No Hit
TCTATGTGGAATGCTGTGACGGAAAGGATTCCTCTCGTCTGTCGGCATGT21.639344262295082No Hit
GGAATCATCATTGAATGGAATCGAAAGGAATCATCGAGTGGAATCGAATG21.639344262295082No Hit
CTTTGCACATTTAAATTCTACCAATCCTTCAAATTCTAGCTCAAGACTTA21.639344262295082No Hit
TTTATAGGCTATGGCACCCAAAGCCAAGTTTCTAAGTTCGGAGAACACAC21.639344262295082No Hit
GAATCAAAGGGAATGATTGAAAGGAATCGAATGCCATCATCATCGAATGG21.639344262295082No Hit
GCCGATCCGCCCCACAGCTCGGGAAGCTGCGGACCCAGAGCGCTCAGGAC21.639344262295082No Hit
GGGCTAGGTTGGCAACTGCACCGAATCTGGTCCACTGATTGGTGGTTGAA21.639344262295082No Hit
GCAAAGCGGCCCTTGCCCGGCTCGTGGCCCACCACCAGCGCCTCGGCGTC21.639344262295082No Hit
GCCTAGCAGGAAGAACTCCTCGTTCGTCCGCATCGAAATCACATTCGCCA21.639344262295082No Hit
GCCCAGTGACTCTCAGGCTCCCGGGCCCCAGGCGCGCGCTCGGGCCGCCC21.639344262295082No Hit
TCGAAGCCCATCGACGAGAAGATAGCCTCGATGCGCTCCATCGCGCGGGT21.639344262295082No Hit
GTGCAGGCCCTGTCCGAGGCGATGCGCGCCATCGCCGACAGCGGCGAGTT21.639344262295082No Hit
CGCGGGCGCGTCCCATCCCTGGGCAAAGATCAAGGTGCTGTCCCATTCGG21.639344262295082No Hit
GGGCCGTGAGCTCGGTGCGGGGCGAGAGGCGCTGCCGGTAGCCCAGCACT21.639344262295082No Hit
GTACCTGCTGTGGGTGAAGGGCACCGTGGGCGACCTTGGGCAACACCTGG21.639344262295082No Hit
GCCTTAAACCACCCACTCGATTCCTGGGGCACTCATAGCCTCCTCCTCAG10.819672131147541No Hit
GATAACAACTGATACGGGTGAACTTTACGAACACTTTAGAATGGTGGTAG10.819672131147541No Hit
GCACTACATCAACAAGGTCAACCTCACGAAGTTTGCCGACCACCACCCGC10.819672131147541No Hit
AGTCTTAATGGAGTAAACCTCAACTCAGCTTGTAAAAGTATCAACAAAAA10.819672131147541No Hit
GGCTGGTGCTCGCCTATTGGGGCGGCATGCAGACCGGCGGCGAACGCGGC10.819672131147541No Hit
CGCCGAAAGTGCGGGTGCAGTTCAGGCGCGCCACCGGTCAGGTCCAGGGT10.819672131147541No Hit
GAGCAATTGTTTGAGATAGTCGTATTCCTCGACCGACGGCGTATCGACCA10.819672131147541No Hit
GTTACAAGTCCTTATTCCACCAGACGCATGATTAGGTAATTTATGAAATA10.819672131147541No Hit
CACCGTGACGTTGACGCGGCCGTCGGCAGCCTCGATGCGGCAGTCGGCCC10.819672131147541No Hit
GTCGTACTGTAAGCCTTAATGACGGCTTCGTCAACACCGGCTTTTTTCGC10.819672131147541No Hit
GCTGGAAACGTGGTTCAGGAGAAGAAGTTCTCCGAGATGCTTGCCAATGT10.819672131147541No Hit
TATTGCCCCAATGGTCTCCAGGTACAGGGGCGCGACACCATTGCGCATAT10.819672131147541No Hit
GCCCAGCGGGTGTGGGCGATGCCGGTGCCGGCGCTGATGCCGTCCTGCTC10.819672131147541No Hit
GTGTGATGGCTGCATTCCACACACACGGTGGAACATTTCTCTTGATAGAG10.819672131147541No Hit
CGTCAGCTCCTGGGCGGCAACGAGGTGGAGGAGTCCAATCCCGTCCAGCT10.819672131147541No Hit
GCGTACTACCGAGCGGCTGCGCATTCATGCCCGTTCTCTGGGCATTACTT10.819672131147541No Hit
ATAGATACCCACGCGACCATGTTTTAGCGGTGCGCCGTGCTCGCCAGTTT10.819672131147541No Hit
CTACTGGATCAATCGTTTCATGAGGTTTAGCACCATGGCCGCCTTTACCT10.819672131147541No Hit
ATACATTTTCACCGTGATCACAGACTTCTAGCCTCCCTAACTGTGAGAAA10.819672131147541No Hit
GTGAACAGCTTGCGTCGCAGCTCGACGATGGCCAACGCGATATTGGGCCG10.819672131147541No Hit
GCCTTAAACCACCCACTCGATTCCTGGGGCTCTCATAGCCTCCTCCTCAG10.819672131147541No Hit
AGGATGCTGGGATTCTGCTAAGGCTCAGTGCAGAGCCCAGCCCTCTGGAG10.819672131147541No Hit
CTTCAAGGTCAATATGTAAGAAAAAATATATTAAAGGCAGCTAGAGAGAA10.819672131147541No Hit
GAAGTGACCACTCTGCGCCTATAAGAGCGTAGGCGGGTGAGCGTAGTCGC10.819672131147541No Hit
GAAATTGTCATTCCTAAGATAGATCTAGATACTACAACAGTTGATGAAAT10.819672131147541No Hit
GACGGCGGGCGATTTTCGTAGCGGTAATAGTCAGCAATCATCACCTTTCT10.819672131147541No Hit
GACGATGACGCGCGCGCGTTCGAACGCAGCACGCTGGGCTTCGATCATCG10.819672131147541No Hit
CATTTCGCCCTGAGCCAGTGGCCAAAGACTTAATTGAGAGAATATTAGCA10.819672131147541No Hit
ATTCGACATCGCTCGCATCAAGGTGCGGTTCCATCAGCCGCTTTTTCCGC10.819672131147541No Hit
CCTCAACGACTTCATCACCTTGAGCGCGCCGGTCAGCGCGCGGGCGAACC10.819672131147541No Hit
CAGCACGGGTGCGTCCAGCGACGCCTCGATGACGTCTTTCTCGAATGTGG10.819672131147541No Hit
TTCGTCCGGAATGCGCCGAAGAATTTGCCATGCTCGAACAACACGTGACG10.819672131147541No Hit
GTTTTCGCCCACGGCCATCAACGGGACGATGCCGTGGCGCTTGCGGTCTT10.819672131147541No Hit
CCCAAAATGTCTGTAGCTAATCAGAGAAATTCAAGTAGAGCCCTTGGCTG10.819672131147541No Hit
NGGGGTTGTGTCGCGGCGACACGCCCTCGTTACGGAAGTTGCGGTTGATC10.819672131147541No Hit
ACAGGCGGCCGAGGAAACTCGAGCGGAACCATCCCAGTGGCAGGCTCGCC10.819672131147541No Hit
CCACAGCAGGATGGCGGTGTTGAGCGCGTAGGCGAGCAACACACCCAGGC10.819672131147541No Hit
CCTTTAGTCTACATGTGAGAGTGAGCCCTGGAATAGGGTGGATTAGGTGT10.819672131147541No Hit
TCTTTGCAAACGGCCGCACGCAGGACCTCTCACATCTTGATTCGACTCTA10.819672131147541No Hit
ACTATATCCCCATCAATAGGTCAAAGGAGTAAATCCATAGGATGCTACAG10.819672131147541No Hit
AGTGAGTTGTTTACGCGGGCATTTTTGGTTTTTTCTGTTTGGTTTTGCTT10.819672131147541No Hit
AATTCAGGAAATACAGAGAACGCCACAAAGATACTCCTTGAGAAGAGCAA10.819672131147541No Hit
GCTTCACCAGCCAGAAATCTCCACAGCCTGCAGTTCCCCTACCTGGGCCT10.819672131147541No Hit
GAACACCAGCATGAAGAAAATACCGTTCCGAAGACCCACTCTCTCCTTCA10.819672131147541No Hit
GCGGTAGTCGGCGTACATCGTCGGGCTGTGGTTGCCCCACACGAACAGCT10.819672131147541No Hit
CTCTTTCTACTGCCTCTGCCTCCATCCCCTTTTGTTGATGGTTTCTTCCC10.819672131147541No Hit
CGGCCATGCCGCGCACGAAAAAGCTGCGATTTCGCGCGCAGGTTTGCTGC10.819672131147541No Hit
CGCCTTACCGTACTCAAGTACAGCTTGCGGCTAGCTTCCTAGTTTGCTTT10.819672131147541No Hit
CCTGGCGGCAGCCGGGACAGAAGATCTCCTCGGCCCCGATATGCCAGCCG10.819672131147541No Hit
ATGCAGATGTCTATATGCGGCTAATATCAATTTAGCTGACTCTCAGAACT10.819672131147541No Hit
ATATCATTGTATGATGATCTCACTGGGGCTCAAATTGAACATACTTGGCC10.819672131147541No Hit
CAAGCCAGCAGGTTACAGTACTGGCTGATATTATGCAAAAAACAAAAACA10.819672131147541No Hit
CTCTTATGATTCACCGAGTTATAGCTCATGTGTGATACAGGAAAAAAAAA10.819672131147541No Hit
GTCCTCTCGAAGGGATCACATTAGCAACACATTTTTTAGCAGACATGGCA10.819672131147541No Hit
CGCACTGCAGGACGCTGCGGTTGCGCGAATAACAGAACATTTTACCATGC10.819672131147541No Hit
TCTCAGATTGCTGCAGCCTTCAATACGCATGTTCCTATAGTGCCTGGCCA10.819672131147541No Hit
CATGGTGGGGGAGTTGGGCCATGAAAATGAGAATCTTCCATAGGAAGGAC10.819672131147541No Hit
TCTCAAGCCCAAGATAGAATTGGTATCCCGAAAGCCAATCTTGCCAAGTG10.819672131147541No Hit
GTTCCTCGACTCGCTCCGGAAGCTGCAGGCCGGGATCACCGCGGTCGCCG10.819672131147541No Hit
GTCCTTCAGATCCTCCGCAGTTTGCCCCTGAAGATCTTCTCCCTCGTGCT10.819672131147541No Hit
CAGGTACGCAGGGACTCCAGGTCGGACAGCTCGAGTCCCAGCCCTGCTAG10.819672131147541No Hit
GAGCAGCTGGGTGTCAGAGCAGTAGGGGGTGTACCAGATCCTGCAGGTAG10.819672131147541No Hit
GCATCAGATAGTCCCCAAAACTTGCCTGGAATCCATCGATTTTCACCACT10.819672131147541No Hit
GTGGCTTCACCAATCCTGGGAGAAGCTAATCGTTTTCTCCCCGTGCCCTG10.819672131147541No Hit
ATCTCCACCGGCGGCGGTGCGTTCCTCGAATTCCTGGAAGGCAAGACGCT10.819672131147541No Hit
GATAACGGACTCTCCCAGTAAGATGAGCGTGAGCATGCCCACACGCTCGA10.819672131147541No Hit
CTCATGCTGAGAGGAAGCAGCACAGGGACCTCAGGCCTGGGGATGGAGAG10.819672131147541No Hit
AACCTAGACACACAGGGCAGAAGCCATGTGAAGACAGAGGCAAAGACTGG10.819672131147541No Hit
CCGCCGTTCTATTGAGGAGACCGAGAGGGCAGGGGCCTTGCCGCCCGGCG10.819672131147541No Hit
ACCTATGGCTACAACCACGGCGAGGACATCCGCGCCGTGCCGGCGCTGCA10.819672131147541No Hit
GAGTCAGCTGAGGTTGCTCTGCTGCTCCTGGCTGGGCTTGGGGTCATCTC10.819672131147541No Hit
GTACGTAACCGGCAAGACGGTCAGCGAGATCGCCCAGCAGCTCAACCGCA10.819672131147541No Hit
ACCTCATTCGGCTGAGCCAGGTCTCGCCTGAGGATGACAGGCCCTGCCGG10.819672131147541No Hit
GAACTGAAGACAAGGGGACTGCATCAGGTGAAGTTTTTCAAATGGGATGA10.819672131147541No Hit
GTTCGGCGCGCCACTCGCGGCCACCAACAGCGCCGCATCCGCCTGTGCGG10.819672131147541No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)