FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003655574

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003655574
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences52
Sequences flagged as poor quality0
Sequence length100
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTCCGAACGTGTCGCTGGTGGCCGGTTTCAAGGCTGACCGCGACGGCAA35.769230769230769No Hit
CAACTAACAGTGTTGATCCATTCTTTTGATACAGCAGTTTTGAACCACAC35.769230769230769No Hit
GATGCGCCAGGATGGCCAACTGTGCGCGCGATGGTCCGACTTCCTTGCGC23.8461538461538463No Hit
CAAAAAGACCTGATAAATCGGTTGGTTTTCCTTAAAATTACCCTGGAACC23.8461538461538463No Hit
CAATAAAGTGCGGTCGGTTTTCAAGGCGTTTTTCAGCCGTTTTGAGTTTA23.8461538461538463No Hit
CCCGAAGCCACCGCCCGCATTGCCGAAGGCGATTTCACCAGCCCCGGCGG23.8461538461538463No Hit
GATGAGCGCGCGCTCGCGGTCGATGCTGTTGCCGGCGGTGCAGCAGTAGA23.8461538461538463No Hit
GCACAGCGCCAGACCACTGACTAGAGACACCCGCGGCTCGAACCGCGCCC23.8461538461538463No Hit
CCACGGAGGAGTTGCCGGTGGCGATGTTGCCGAAGGGCCCGCAGTGCACC23.8461538461538463No Hit
CCAGCAAGAGGCTCGCAACCAGCGGCGCCCAGGCAGCGCACTTGGCTGGC11.9230769230769231No Hit
GCTGAAGTCTGGTGAAGATAGCATAATTTGTTTTTTCTGGTTCCTCCTCC11.9230769230769231No Hit
GTTCTGCAGATGATGTGATTGGATCGAATGGTAACAGCGGCTACGCGCGA11.9230769230769231No Hit
TTTACAATCCATCTTAAATCTACCATTTTGTGGTATTGTTGTCTCCAGGT11.9230769230769231No Hit
GCTCGCCGCAGGGCATTGCCTCGGTGACGACGCACGACGGCCGCTTCACC11.9230769230769231No Hit
GGAGCACCCCCGCATCTGCCAATCGGTGGGGATAGCCCCCGTACGGACAA11.9230769230769231No Hit
GGCCGTGGACGCGGCCCTCGACCGGCTAGAGGCCGCCTTCCTCCAGCGCC11.9230769230769231No Hit
CTTTTCCAACTGGTTCGCAAACTCGCTGGTGATGTTGACGCCATTGACCA11.9230769230769231No Hit
TAATAAAACTATTGAGAACACTAAAAAAATCAAAAGTGGGGAGAGTTCTA11.9230769230769231No Hit
AGCTGATTCTGGACGGCCAGCAGAGTGCGTTGTGCGTCTTGCTGGCTAAA11.9230769230769231No Hit
CCCCCTACGCCCCCGATGCCGTCGGTTTCGGTGAAGACGACGCAGCCTTC11.9230769230769231No Hit
ATCTCCCACCCACAAGTATCCTGGTGAAGGAGGGGATTCTCAGGCCTGGT11.9230769230769231No Hit
GCCTTGACTGGCCTGAACTGGTAGAAGTAATACAGGTTGAAGCAGATGCC11.9230769230769231No Hit
GTGCAGCGCGCTGTGGGCGACCAGCTCACCTGCGTTTTCGTCGATCACGG11.9230769230769231No Hit
GGGCCGCCGTCGTGCTCGCGGGCCACGGCCTGGAGCCGCGGCACCTGCGC11.9230769230769231No Hit
GCGTAAGCCGGGGCCGCGGGCGAACGCTTGGCAGGTGCTGGTGCCGGCTT11.9230769230769231No Hit
AGCCATTCCCACGCTGGTGCGCCTGCTTGGTCAGGACGACGGCGCCAAGT11.9230769230769231No Hit
GTGCTCAATTTGTTGCTGACGGTACTCGCCATCGTCACCGTCCGCGCCGG11.9230769230769231No Hit
GGTCAGCGCGGCCGAGGTCGAGGCGGCGGGGCCGGTCCACCGCTGGCGCT11.9230769230769231No Hit
GTCCTGGAAATTCTGGAGGGCACCGAAATGGTTCTAGCGGTAATACGCTC11.9230769230769231No Hit
CGCGCAGGGCGTGCTGCACGCGGTTGCCCAGCTGTCCGAGCACGCTGTCG11.9230769230769231No Hit
GCGGTGGCACGTGAGATTCACGCCAGGATGGTTGAGCTTGACCCTAAGGC11.9230769230769231No Hit
GGAACGCGTTGACCGCCACCACCGGGGTGACGCCGTGGCGCCGAATGATC11.9230769230769231No Hit
CCCCGAACGCCGACAAGCTCTGCCCCACCTCCGGCAGGTAGCTCGAGATC11.9230769230769231No Hit
CCGCAGTATCGCCCTCGCCATCACCGTCTTCGGCCTGGGGCGCCGGGGGC11.9230769230769231No Hit
CAATGAAGGCCCATTTGATGATGTGCCGGCACTGTTCGAACTTCAAGAAG11.9230769230769231No Hit
ATGTTATCTGGAAACTAGAAGTGAAACCAAATTAAACCTGGGAAGTTGGC11.9230769230769231No Hit
GTTCCGCCCCGCGCAGCGATGTCGAGCAGGCCGCGCGCGACATCGAAAGC11.9230769230769231No Hit
GCTGAGGGGCCTGTGGGGCTTGCTGCTTGGGACATCGATCACGGCGATGA11.9230769230769231No Hit
GTGAAGAGCAGCGCCGTGACGATGGCGCCCAGGGCAACGTCGCGCCAGGC11.9230769230769231No Hit
CATCTCGCGTCGACAAGCTCGGCTTCTCTTTGATGGCCAATCCTTGCAAT11.9230769230769231No Hit
CTTGAATGGACGCTGCGCTACGTGCGCGAGCGCCAGGCCTTTGGCAAGTC11.9230769230769231No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)