FastQCFastQC Report
Tue 10 May 2022
EGAF00003656497

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003656497
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences367981
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTATACACATCTCCGAGCCCACGAGACGGCATCTCGTTCATCTCGTATG8610.23397947176620532No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT4950.1345178147784804No Hit
ATACACATCTCCGAGCCCACGAGACGGCATCTCGTTCATCTCGTATGCCG4060.11033178343447081No Hit
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG3820.10380970756642327No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)