Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00003657496 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 413216 |
Total Bases | 41.3 Mbp |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 48 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 2546 | 0.6161426469449391 | No Hit |
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 675 | 0.1633528227367769 | No Hit |
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA | 626 | 0.15149461782699605 | Clontech SMARTer II A Oligonucleotide (100% over 25bp) |
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT | 544 | 0.13165027491675055 | Clontech Universal Primer Mix Long (96% over 26bp) |