FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003657933

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003657933
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21
Sequences flagged as poor quality0
Sequence length100
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGTTCCGTATGGACTTGGAAGCCCTAGGTCCAAGAGAGCCTTGGAGAAT29.523809523809524No Hit
GTACATGGGGAGATTCTCCCCAGACGCCGAGGATGGCCGTCATGGCGCCC29.523809523809524No Hit
GTGGACGACACGCAGTTCGTGCGGTTCGACAGCGACGCCGCGAGCCAGAG29.523809523809524No Hit
CCACAGTAACACTTAAATATGGTTAAGACTCGAATGCAGAAATTTGGTTG14.761904761904762No Hit
TCATCACATCGGGCAGCTCTGGCGGGCTGGAAAACGGCTCGATGCACAGG14.761904761904762No Hit
TAACAATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGTCCACTTT14.761904761904762No Hit
TATCAATGGAGTGAGCCCAAAGGTTCGAAAGGTGTTGCAGCTTCTTCGCC14.761904761904762No Hit
GCCCGGGGGGGATGTCTTACAAACCGAACTTGGCCGCGCCCATGCCCGCC14.761904761904762No Hit
ACCCATCTATAAGGCCTTTAGGTCCGACAACTCTTTCAGCTTCTTTGTGT14.761904761904762No Hit
GAATCAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATC14.761904761904762No Hit
GGGTTATCCCTTCTCCCTGTGCCTTCCCATCTCGTCCATGAGCCTAGGTC14.761904761904762No Hit
AATCATGGCCTCAGTTCCGAAAACCAACAAAATAGAACCGCGGTCCTATT14.761904761904762No Hit
ACACCTTTGTGCACGAGCCCCTGGTAGATGTCCAGAATGTCTGTTTCCAG14.761904761904762No Hit
GTTTTAGACAATTACTTAACATCCCCCCTCCCAGAAGAAGTGGATGAAAC14.761904761904762No Hit
CTTGGAGGAGGTGGCTGTGCAACAGACAGGTGATGATGATGAAGTAGATG14.761904761904762No Hit
GAATAGATTTAAGCCTTTATGCAGCAATTCCCACCCATGTAACCAGTTAT14.761904761904762No Hit
TTCGAGCTCTTTCGACGTTTTGAAGGAGGGTTTTAAGTAATGATCGAGAT14.761904761904762No Hit
ATGATAGTGACATCGCATAAAATGCCCCGAATGCGCTGCTCATTTAAGAT14.761904761904762No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)