FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003658014

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003658014
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31
Sequences flagged as poor quality0
Sequence length100
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCACAGCGATCGCCACTGGAACGAGATGATGGGTTCTCAGGGCATCACC39.67741935483871No Hit
GAGTTGCACGAAACCCCTGTCCTGCAAGCGTGAACGCGTTACGAAAGTTT26.451612903225806No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG26.451612903225806No Hit
GGGCAGGAGATCGTCGAAGACCGTCAGTTCGCCCTCGAACAGACCCCAGG26.451612903225806No Hit
GCGCAGGACTGCCGACAATTCGCCACCGGACTCGCGATAGGCCTGCAGTT26.451612903225806No Hit
GCCGATCGGCTCGTGGCAGTCGCGCCACGCGACGCCCGCAGCCTGCAGGA13.225806451612903No Hit
GGATGTAGGGGTCCTCGACGATCGCCTCGAGCGTGCCCGGGTTGGTCACC13.225806451612903No Hit
GTTCGGAGATCGTCGGGGCGAATCCCCAGCTCACCCCGGCGGAAACCGGG13.225806451612903No Hit
CTTGCCGCATCGGTCGCCGCGTGCCACCTGTGGCAAATGCCGGCTGACGC13.225806451612903No Hit
CTTCAGAACCATGACCTCGTGCAGAGGGATCACTGGTATATGTGGGTCTC13.225806451612903No Hit
CCGCGTGCTCGACGTGCAGCGTCGGCACGACGCTTTGCGGGGCTCGGCCG13.225806451612903No Hit
CTTCGGTAGATGTTCAAGCCGATCACCGAGGAGCCGCGCCGCGATGTCCG13.225806451612903No Hit
ATCATTGATGGAGCGGATATCGCTGTCATCGCGGACGAGAAGGAATTGGA13.225806451612903No Hit
GTCTGGCCCAGGCCGATGGTGTAGCCGTCGGGCTTGGCCTTGGCCACCAC13.225806451612903No Hit
GTCCTGGCAGATCGGCCGGTGGCCGGTGGCGCACATCCGCGAGTTTATCA13.225806451612903No Hit
ATTTCTGAGACCTCCCAGCAGGTCGACGCAGCTATTGCCGCTGGAATCGA13.225806451612903No Hit
ATTCAGTGGGGAATGTGTGTGAACAAGCGCTTCCCTCCTGAAGGCGAAAG13.225806451612903No Hit
GGCTGGAATGTTTATATCCCGAAATTTGAATACACAACAGACAATGCAGC13.225806451612903No Hit
CATTCATATAACCCCGAAGAAAGAAGAGCCAACATATGAACATCCGTATG13.225806451612903No Hit
CTCAAGCACATCTCCGACCTGATGCGCTCGGGGGACGCGGTGCCGCTGAA13.225806451612903No Hit
GCTTCGAGCACACCGAGCGCCCCGGCATCGGCGGGGGTCACGGAGGGGCA13.225806451612903No Hit
CAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAACA13.225806451612903No Hit
CGTTTAGATGAGGACTTCAGATAAATGAGGGTGCCCACAAATCTCCTGAA13.225806451612903No Hit
GGAGGGCGAGTCCGGTTTGATGGATCGCTCATCACGTCCGCATTCATGCC13.225806451612903No Hit
GCGGAACGCACACTGTGGCAACCGCACGGAGACGATCGGGAGCTGGCAGT13.225806451612903No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)