FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003658021

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003658021
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences176
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTAATTTG31.7045454545454544No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTA31.7045454545454544Clontech SMARTer II A Oligonucleotide (100% over 25bp)
TCCTTGTTATCTGAGCACTCTGGGAGCCAAGGTGGGAAGATTGCTTGAGG31.7045454545454544No Hit
GTATTTGGTTGTGATACTGCTTTCCAGAGCCAAAGAAAATAAGACTGCTC31.7045454545454544No Hit
CTTCCGTACTAGTCAGTTTTCGAACTAGAGGGGGCTTTGGGATCACCAGT31.7045454545454544No Hit
GTCTTATATGGAAGAACCCAGTCAGCGTGATGATATCTCTCGCCTTACAG31.7045454545454544No Hit
GTTCTGAGACCGTTCTTCCACCACTGATTAAGAGTGGGGTGGCAGGTATT31.7045454545454544No Hit
CATTTGGGATTTGCTGCCTGTAGAGTAGTCTGGTAGATTTGGCTCCATCA31.7045454545454544No Hit
ATACTAAACGATCACTTTAGATTTTCAGGAGTGTGTGCCTAGTTTGTGAT31.7045454545454544No Hit
AGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCT21.1363636363636365No Hit
GAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCG21.1363636363636365No Hit
GGCCACACAGGGAGCCCAGGCTCAGTCTTCAGGGGTCAAAAGAGAAAACC21.1363636363636365No Hit
ATTATCAACATTATGCAGGATCGGCTCAAAGCCTGTCAGCAGAGGGAAGG21.1363636363636365No Hit
TTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTG21.1363636363636365Clontech Universal Primer Mix Long (96% over 26bp)
ACTTGGAAGGCTGACGCAGGAGAATCGCTTGAACCCGGGAGGCGGAGGTT21.1363636363636365No Hit
CTTAAGTGGTTTGCAAAAGCCTATGTTGAGAAAGGTGTTTAATAGGTTGT21.1363636363636365No Hit
CCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGC21.1363636363636365No Hit
ACCTCCGACTTTCGTTCTTGATTAATGAAAACATTCTTGGCAAATGCTTT21.1363636363636365No Hit
CAGTGTATAAATAAATGAGCAAAGGACAAGAACACACAGTCTACAGGAAA21.1363636363636365No Hit
CCCGTGGTCTCGGCCGCGCCGGGCGTTCCCGCCGTGCGCCGCGCGCCCAA21.1363636363636365No Hit
CTCCAAAGTAGCTGGGACTACAGGCGCCCACCACCACACCCGGCTAATTT21.1363636363636365No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTT21.1363636363636365No Hit
AAAAAGAACTCTCCTCAACTTGAAGAAGAGTGTGGCAAGCTCCCTGGCTG21.1363636363636365No Hit
TCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT21.1363636363636365Clontech Universal Primer Mix Long (96% over 26bp)
CCCATGCAACAACAAGGGAGCTCACTCAGTGGGTTTGATGTGGTGGATGC21.1363636363636365No Hit
CCCCAGCTGAGCGGCTTCTATTCTCTTTCTCTCCTTCTAAAAGGGTTACT21.1363636363636365No Hit
GTCGAGACGCAGGCGCAGCCGGCGGGGCAAACTTCGGGCGTTACCCGCAG21.1363636363636365No Hit
GGATTATTGTGTCTGTTTCAGATGTAATTTCATGCCTGAGAATTTACATT21.1363636363636365No Hit
GTTTTACCCTACTGATGATGTGTTGTTGCCATGGTAATCCTGCTCAGTAC21.1363636363636365No Hit
GTGTGTGTTTGTGTGTTTCAAGGTCAGAACAGGTTTTTTTGTTTTTGTTT21.1363636363636365No Hit
TCCGTCAATTCCTTTAAGTTTCAGCTTTGCAACCATACTCCCCCCGGAAC21.1363636363636365No Hit
AGTCAGAGTTGGTTTTATTCAACTGGTACAAGGAGTTGTGACATGCTTTA10.5681818181818182No Hit
TGTCACACTGGGTGAGAAGATGACAGAGGAAGAAGTAGAGATGCTGGTGG10.5681818181818182No Hit
CTGTGGTAATTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCTTCG10.5681818181818182No Hit
CAACCAAGCGCATCCAATCTCAAGGAATCTTTAAGCAGAGAAGGGCATAA10.5681818181818182No Hit
TGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCTC10.5681818181818182No Hit
GGAGATGAAGAGGAAAATACACTCTGGTCACTTGTGGTAATAGTTTACCA10.5681818181818182No Hit
GATCTGCTTACAAGAGCTCCTGAAGGAAGCACTAAATATGGAAAGGAAAA10.5681818181818182No Hit
CGGCGCGCGTCTCCATGTAGTTCGAGACCAGCCGGTTGTTGGCGAACTCG10.5681818181818182No Hit
AGATGAAACCTGCCTCCTCGAGAAAGACTTCCTAATCCACCAGTGACTAG10.5681818181818182No Hit
AATCAGATTTGTCCATCTCTAAGTTCCACAAACTGAACATTCATCAAAAA10.5681818181818182No Hit
ATGTAGCAGCAATAATGGCTTTCCAATTTATGCTGCCATCATATGAAATA10.5681818181818182No Hit
GAACAAGATCGATGCCGCCACGCGCGACGCCTGCATCGCCCGCGTGAAGG10.5681818181818182No Hit
CCCCCCGTGGCGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCG10.5681818181818182No Hit
ACCCCCAGGCGCACAACCGTCGGAGCCGATGCAGGCCAACTGTGTCCATC10.5681818181818182No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10.5681818181818182No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT10.5681818181818182No Hit
CCTCCATAAATCTTGTATTTCCTTAATAATTTATTTGGCAATGTATTTAA10.5681818181818182No Hit
CCACACCTTCTCACTTATAAGAGGGAGCTAAACATTGAGTACACATGGAC10.5681818181818182No Hit
CTTCTCCACAACAGAATTGGACTTTGAAGCAGGACACAGAAGTTTCCATC10.5681818181818182No Hit
GTACAGTGAAACTGCGAATGGCTCTATAATTAGTTATGGTTCCTTTGGTC10.5681818181818182No Hit
CTCATTTGCCCCTTTTTTTTTGTGACTCAGCGTCAGATTCTGCCCTTTGC10.5681818181818182No Hit
CAATTTAACAGCTTTGATGAGGAAGGGAGATACACACACACACACACACA10.5681818181818182No Hit
CTCACCATGTTGGCCAGGATGGTCTCGATCTCCTGACCTCGTGATCCGCC10.5681818181818182No Hit
TCTTTCTGCTTCAAAGAAGGTTTTAGATTAGCAATGGCTGGATCAATCGC10.5681818181818182No Hit
GTGGTATCAACGCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTAAAA10.5681818181818182No Hit
GGTCCGGAGAGGGGCTGACCGGGTTGGTTTTGATCTGATAAATGCACGCA10.5681818181818182No Hit
AGAATTACCACAGTTATCCAAGTGGGAGAGGAGCGAGCGACCAAAGGAAC10.5681818181818182No Hit
GAGTGTTAGTTCTGGTGCTCTAACTTAAAACTCAAGAAATATTTGACAAG10.5681818181818182No Hit
CTCCCCAGCTGTATTTCCAAAATGTCGCTTTCTAACAAGCTGACGCTGGA10.5681818181818182No Hit
GTGTATGATTCAGCAAAATCATACACCATCTACCGTGATGACTGCCAACT10.5681818181818182No Hit
GGTTAGTTTTACCCTACTGATGATGTGTTGTTGCCATGGTAATCCTGCTC10.5681818181818182No Hit
CCCATGAACTCTGCGTTGATACCAATGCTTCCCATGTCTGTCTCTTATAC10.5681818181818182Clontech Universal Primer Mix Long (95% over 23bp)
GTATATTTACTTAGGCCAATAAAAATTAAGTGTCATGTAACATGAGGAAA10.5681818181818182No Hit
AGCCTGGTCAATATAGTGAAACCTTATCTCTACTAAAAATACAAAAATTA10.5681818181818182No Hit
TCAGAGAGCTGACCTGACTCCCACCTTGGACATTTGCTATTCTTAACTGC10.5681818181818182No Hit
GATTTTAAGATTTCATTGGAAACGGGAATTTCTGCATAGAAACTCAAGAC10.5681818181818182No Hit
TCCCATGTCGGTGCCGTCGCCTCTATGTACTCGGAGACGTTAATGCAGAG10.5681818181818182No Hit
GTGCTTTCAGGTTGCCTGGAAGGGATGTCAGGGAGCCCACCGGCCTCTGT10.5681818181818182No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA10.5681818181818182No Hit
GAAAAAACGATCAGAGGGGAGTTTGACTGGGGCGGTACACCTGTCAAACG10.5681818181818182No Hit
GTTTTAAGCAGGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGT10.5681818181818182No Hit
GGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCCCCCGGCCGTC10.5681818181818182No Hit
GTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACA10.5681818181818182No Hit
AATCTAGAGCTCTGAAACTGAAGCTCTGTTAATTTTATTTATTTATTTTT10.5681818181818182No Hit
GTCTCGTATTTAGGAGCAGGGAGGGGAAGGGTGAAACAAAGAGAGGATGG10.5681818181818182No Hit
ACTCCAGGGTGTTCCACCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.5681818181818182No Hit
CCACAACTTCTCACTTATAAGAGGGAGCTAAACATTGAGTACACATGGAC10.5681818181818182No Hit
GTCCTGTATTGTTATTTTTCGTCACTACCTCCCCGGGTCGGGAGTGGGTA10.5681818181818182No Hit
TCTGTAGTTTGTCCTTCAATCTGAGAGTAATTTGCAGAAAGGGAATTTTA10.5681818181818182No Hit
ATAACCAGGAGCCAAGTCCATATAATAAAGTTGGAATACCGAGGTTGACG10.5681818181818182No Hit
ATCCTCTTGCCTCAGCCTCCCGAGTAGCTGGGACCACAGGCACGTGCCAC10.5681818181818182No Hit
GTGTTGATCGTGGTCAGCGTGTACTTGACCTCGGGAAACTCGCGCAAGAT10.5681818181818182No Hit
AGTCTGTGTCGATCTTTAGCTCTCACCATGAATGTACATGGTACATTGTG10.5681818181818182No Hit
GTGCGTGACGGGCGAGGGGGCGGCCGCCTTTCCGGCCGCGCCCCGTTTCC10.5681818181818182No Hit
TCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGT10.5681818181818182No Hit
CCCTATTTAAACAGGATAATGACGCAGATCGGGAGGGGCAGGCCCTTTCC10.5681818181818182No Hit
GCCGCGTGCGCGGTGCTAGAACACCCCGAAGCTCGACGGCGTTCGTTCAC10.5681818181818182No Hit
CTGCAAACTCTGCCTCCCGGGTTCAAGCAATTCTCTGCCTCAGACCCCTG10.5681818181818182No Hit
ATTCAGGCCCTGGCAGGCATCATAGGATCAGAGATTAATCATTCCCACCC10.5681818181818182No Hit
GGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATT10.5681818181818182No Hit
GTCAGAGGTAGACGGGGACGTATACGTACACACCGTCGCCGAAAATGAAG10.5681818181818182No Hit
CTACAGTGGTGAAGAGACCAGGAGGCAGCTCTCAGTGAAACCAACATTGC10.5681818181818182No Hit
TATTAACCCAGCATGGTTTGTTCTAATGCTTCTTGTTGGCAGCTGCCACC10.5681818181818182No Hit
CAGGAGCAAACTGCCTTCTTTCGGGCACACTCGGTCGACCACCGCCAATA10.5681818181818182No Hit
GACCACATCACACCCAGTATGTACACGCAGTAGCCTGTGTTGTGCCGCAG10.5681818181818182No Hit
ATTTGGGGCAGCTGGGGCTGGTTATAAGAGCCTATGTGTTGTCCAAGGCC10.5681818181818182No Hit
GGGCTTATCTTGTACGCTTTATCCAAAGAAATATATGTGATTAGCGCAGA10.5681818181818182No Hit
GCCAACCTAAGAGCTTCAAAATCGGGATTCCTTACTGAGAAAGATGTATA10.5681818181818182No Hit
GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTTTAACAATGCTT10.5681818181818182No Hit
CTCTAGATATGAGCTGCTTTTATCATGCAGAAACAATTATGAACAAGATC10.5681818181818182No Hit
CTTGTATATTTGGACCTCAGCTGGGATGTCTGGGACAGCTGCTGTCTCTT10.5681818181818182No Hit
GTTCAGACATTTGGTGTATGTGCTTGGCTGAGGAGCCAATGGGGCGAAGC10.5681818181818182No Hit
GAATTGGAATGGAATGGAATCGAATGGAATGATATGGAATGGAATGGAAT10.5681818181818182No Hit
CCTCGCGGCGGACCGCCCGCCCGCTCCCAAGATCCAACTACGAGCTTTTT10.5681818181818182No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGG10.5681818181818182Clontech Universal Primer Mix Long (96% over 26bp)
GTCTTTGGGTTCCGGGGGGAGTATGGTTGCAAAGCTGAAACTTAAAGGAA10.5681818181818182No Hit
CCCATGACCCGCCGGGCAGCTTCCGGGAAACCAAAGTCTTTGGGTTCCGG10.5681818181818182No Hit
ATCCTGTCCGTGTCCGGGCCGGGTGAGGTTTCCCGTGTTGGGTCAAATTA10.5681818181818182No Hit
CTACCATGGTGACCACGGGTGACGGGGAATCAGGGTTCGATTCCGGAGAG10.5681818181818182No Hit
TCCTGCCGCTCCTCGTGCTTGCCGGTGATCTCCACCACGCCATCCTTGGT10.5681818181818182No Hit
GCGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10.5681818181818182No Hit
AAGCAGGTCTCCTCATCTCTTAAACGCTATACATATGAAGTAGATAAAAA10.5681818181818182No Hit
GCTTGGGTATTGAATCTAGTCAGAGCTCGTACTATAAACTACTACACTAA10.5681818181818182No Hit
CTCGGCGGCGACGACCCATTCGAACGTCTGCCCTATCAACTTTCGATGGT10.5681818181818182No Hit
GCTAGGAATAATGGAATAGGACCGCGGTTCTATTTTGTTTGGTTTTCGGA10.5681818181818182No Hit
GTAATAAGCAGTGCTTGAATTATTTGGTTTCGGTTGTTTTCTATTAGACT10.5681818181818182No Hit
GAGTTGTAGTGAGCCATGATTGCGTCGCTGTGCTCCAGCCTGAGTGACAG10.5681818181818182No Hit
GTCTCGGAGATGGCGCTCGCCATGGGCTTCATGCCCGTGGACATGGGATC10.5681818181818182No Hit
CTCCGGCCCCGGCCGGGGGGCGGGCGCCGGCGGCTTTGGTGACTCTAGAT10.5681818181818182No Hit
CATAAAAGTCATGAAGAAAACATAGGGGAAACACTTCAGGACATTGATCT10.5681818181818182No Hit
GACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTC10.5681818181818182No Hit
GTTCCGCCTGGGCGGGATTCTGACTTAGAGGCGTTCAGTCATAATCCCAC10.5681818181818182No Hit
CATGATGGTCATGAAGGCCATGTACAGCAGAACCTTGATGAAGCCTGTAA10.5681818181818182No Hit
TGTGTAAACAACCTGTAACCTACTCTTGAGCCAATGACTGAGTTTTAGCC10.5681818181818182No Hit
GGATGTTGTAGTCAGACAGGGTGCGCCCATCTTCCAGCTGCTTTCCGGCA10.5681818181818182No Hit
CACCAAAGCCGCCGGCGCCCGCCCCCCGGCCGGGGCCGGAGAGGGGCTGA10.5681818181818182No Hit
TCTTCTGAGAGAGTCTCTAGAAGACATGATGCTACACTCAGCTTTGGGTC10.5681818181818182No Hit
GCCAGATTCAGAGGAAAGAAGCCAGGGTAGAGTGAAAGGTATTAGGCAAC10.5681818181818182No Hit
GATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACG10.5681818181818182No Hit
GAAAGAACACAGAAAATGGGGGTAGAAAACTTTTTTTTTTTAAAACCAGA10.5681818181818182No Hit
CCTTAGCACTATCAGGGGGAAACCACCTACTAGAGCCACAGTAATGGAGG10.5681818181818182No Hit
GCCCAGGCCACACAGCTGCACCCAGCCCTGCCCGGCTCCTCCCAGGCCTG10.5681818181818182No Hit
GCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGTACGCACGGC10.5681818181818182No Hit
CCTCGCGGCGGACCGCCCGCCCGCTCCCAAGATCCAACGACGAGCTTTTT10.5681818181818182No Hit
CGCTTGCGCTGGTTCCCGTGCAGGACTTCCCGCACCGCCTCGTACAGGGT10.5681818181818182No Hit

[WARN]Adapter Content

Adapter graph