FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003658031

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003658031
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length100
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAATGGGTCG316.666666666666664No Hit
TCTTCCCACTATTTTGCTACATAGACGGGTGTGCTCTTTTAGCTGTTCTT211.11111111111111No Hit
GGACGCCGACCGCTCGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTC211.11111111111111No Hit
CTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGACACTCAGCTA15.555555555555555No Hit
GAAGAGAGAGGTTGCCTCTGCTTAAAACACAAGTGGCTTCTTCATAGGAA15.555555555555555No Hit
ACGCAGAGTACATGGGAGTCTCAGCGGCAGGGCCGGATCTCCTTCTACAT15.555555555555555No Hit
GGTCAGCAGCTCTATGCCGCTGTCAGTCACCACGACGTCCTCCTCGATGC15.555555555555555No Hit
ATTGGGAAGAAAGGACAACAGAAGACTGTCTAAAGGATGCCTGGATTCCT15.555555555555555No Hit
TGACAAATGTGCTCATCAGGGCATCCCCCACCCTGGTACCCCATAGTAGC15.555555555555555No Hit
AGGTAGAAGAGCTGAAGGCACTCGTGGAAGAGCTTGAAGCTGATCTCCTC15.555555555555555No Hit
ATGGTACTGTGGCTCAAGGGAGTCACCTTCAATGTTACCACCGTTGACAC15.555555555555555No Hit
CTTCTACAGTAGCTTTAATTTTGGCATAGCCCATGTTGTTTTCCCATCAA15.555555555555555No Hit
ATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAAT15.555555555555555No Hit
CTCACAGTCGCATCATAATCCTCTCTCAAGGACTTAAAACTCTACTCCCA15.555555555555555No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)