FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003658032

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003658032
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18
Sequences flagged as poor quality0
Sequence length100
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCAGAGTACATGGGTACTTGGATAACTGTGGTAATTCTAGAGCTAATA316.666666666666664No Hit
GACCCAACACGGGAAACCTCACCCGGCCCGGACACGGACAGGATTGACAG211.11111111111111No Hit
CCTTACTACCAGACAACCTTAGCCAAACCATTTACCCAAATAAAGTATAG211.11111111111111No Hit
TCCAAACAGTTTTTTAAAAACAGTCAACTCAATCAAAACCCACTACTTCA15.555555555555555No Hit
CTCTAATGCTACTGCGCCCTGGGGGCTCCCAGGGCCTGGGCAACTTAGCT15.555555555555555No Hit
GTATAGGGCTGTGACTAGTATGTTGAGTCCTGTAAGTAGGAGAGTGATAT15.555555555555555No Hit
GAAAAAATTCAGGTTCTAACAGACAAAATTGATGTACTTCTGCAACAGAT15.555555555555555No Hit
CTCCTACACCTGCATCTGCGGCAGTGGTGAGAACTCAGCCGTGCTACACT15.555555555555555No Hit
ATCCTACTGTATCTGAAAGAAGAACACTGTAGCCGCTTGGCAGGACCATT15.555555555555555No Hit
GTGCATTTATCAGATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGG15.555555555555555No Hit
ATACCAGGAACTGGGATTCTAGGTTGCCCCAGACACCAAGGCATCAATAG15.555555555555555No Hit
GAATAGTTCCAGGGGGTAGTCCCGATACATCAGCACACCTGCCTCCCGGT15.555555555555555No Hit
CTCGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGA15.555555555555555No Hit
GCTCAAGTACCGATGCACTCCCCGGAAGGCCTCGGGGATGGTGAATCCCC15.555555555555555No Hit

[OK]Adapter Content

Adapter graph