FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003658039

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003658039
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences121
Sequences flagged as poor quality0
Sequence length100
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTCATTTACAATCCTGTAGACTATGACCTTCCACCAGGATCTACTCAAG21.6528925619834711No Hit
GATCATGTTTGAGACCTTCAACACCCCAGCCATGTACGTTGCTATCCAGG21.6528925619834711No Hit
CCAGAGATTTCTGAAGACACAGCTTTTTCCTTGTTCTTGGCTGGTGGGTG21.6528925619834711No Hit
CTCCCGACCCGGGGAGGTAGTGACGAAAAATAACAATACAGGACTCTTTC21.6528925619834711No Hit
GTGAAATTCTTGGACCGGCGCAAGACGGACCAAGAATTTCACCTCACCTC21.6528925619834711No Hit
GTATTTAGGTTCTTTTTAGAATCCATGAACCTTAAGCTGTTCCTCCTTTA21.6528925619834711No Hit
CACCAGCACACAGGAGAAGAAGCATAAATGAAGCCTCTTTGGGGTGAAGC21.6528925619834711No Hit
GACGGGACGCATGCCAAGATCTTTTCCCAATTTGAGAAGATCTTCACGGA21.6528925619834711No Hit
GTTAATGCTATGAAAAACAGTGAACTGATTTGATATGATGGAGAGGATCT21.6528925619834711No Hit
ATTTTTATTATTTGCTTTTTTCTACTTTGGATTCATTTTGTTCTCCTTTA21.6528925619834711No Hit
ATGTGTAAATGATGAAATCTGATTAAATGGTTAAAATAGAAATCAATTGG10.8264462809917356No Hit
CCTCAGGACCTCCCACATGTACAGTTCCCCTGCCTCTTGCCCCGGCTAGT10.8264462809917356No Hit
ACTCAGAGACATGAAGAACAGCAGAAGAGAGACTTTTAATGGTGGTCTTG10.8264462809917356No Hit
GATTACAGGTGTGAGCCATCACGCCAGCCTGCATTTTTTAAAAACTATAT10.8264462809917356No Hit
GGTAGGAAGAATCAATATCGTGAAAATGGCCGTATTGCCCAAGGTAATTT10.8264462809917356No Hit
GTCCAGAGATGCTGTTCAGGAGCCAGCGCTTGGAGTTGGAAACCTTAGAA10.8264462809917356No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT10.8264462809917356No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT10.8264462809917356No Hit
GCTGCTAACCTACTGGCTGGGTGTTGTGTGGCTTGGCAATGGAGTTCTGC10.8264462809917356No Hit
TGCCATGGTAATCCTGCTCAGTACGAGAGGAACCGCAGGTTCAGACATTT10.8264462809917356No Hit
TACTTGTCTTGCATAACTGAAGCTTTATACCTGTTGAACAACTCTCCATT10.8264462809917356No Hit
GAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGAAC10.8264462809917356No Hit
GATAATGCCTGTCTGGCAGGTCTGTGGTTAGGATTGGGGTAATTATGTCA10.8264462809917356No Hit
ATGCGATGATTCCATTCCATTCCATTTGAAGATGATTCCATTCGAGATCA10.8264462809917356No Hit
TGGATCTTCTTGCGTGGTGCTCGAAGGGCTCTTTGGATCTCTGGGCTTTT10.8264462809917356No Hit
GTTTATCCTGATGGAAAGAGTCCAGTAGAGAGGAAGAGATTGATGATGTA10.8264462809917356No Hit
GTCTCACAATTGGTCACAGAGTGCAGATGAAACTCAAAGTCAGTCGTGCT10.8264462809917356No Hit
AATTTGCAAGAAATTTGACTAAGTACTATTGAGAAGAAAATTAACATTTG10.8264462809917356No Hit
GTGTTCACATGCAAGGCCCTCTGCAAACTGGTCCCAGTCGGCTCCTCCAG10.8264462809917356No Hit
GCTTGGGCCAGCACAGTTCTCGTGCAAAAGCACCTTTGCAGCTTCTGATC10.8264462809917356No Hit
CCCAAAAATAACAGTAAGGCTGAGCGACTGAAAGAGGCAGAGGCTGCTTG10.8264462809917356No Hit
GTGTTCGACAGCACGCAAGGCAAGGGGCCGGCGCCGATGATTCCCGGGCA10.8264462809917356No Hit
ATGAGCCTGGGCCAGAGAATCTGGTGCTGAGCTGCTGCAGTCAGCTGAGC10.8264462809917356No Hit
CACATTGGAGTCTGCTGGGAATTTTCTGGCCACGTCCAGTTTCCCGGACA10.8264462809917356No Hit
TCAGAGAGCTGACCTGACTCCCACCTTGGACATTTGCTATTCTTAACTGC10.8264462809917356No Hit
ACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCGACGACCCATTCGAACG10.8264462809917356No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTGCGTTGATACCACTGCTTCCCATG10.8264462809917356Clontech Universal Primer Mix Long (95% over 21bp)
GTCCTAAGGCGAGCTCAGGGAGGACAGAAACCTCCCGTGGAGCAGAAGGG10.8264462809917356No Hit
CTCTCAGGGAACATGACGATGACGATAAGTTAGGTGACAACTGCAGACGC10.8264462809917356No Hit
CTCTCGTACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGT10.8264462809917356No Hit
CTTTAAATCCTTTAACGAGGATCCATTGGAATTACCGCGGCTGCTGGCAC10.8264462809917356No Hit
AAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGG10.8264462809917356No Hit
GTCCGCCGCGAGGCGAGCCACCGCCCGTCCCCGCCCCTTGCCTCTCGGCG10.8264462809917356No Hit
AAGTAGACTAGGCCCAGGCGGCGCAGGCTGCTGAGCCTGTCTCCAGAGGG10.8264462809917356No Hit
CCTTCGCTGACGCCATAAAACTCTTCACCAAAGAGCCCCTAAAACCCGCC10.8264462809917356No Hit
CACCAGCTCATCGCAGCGTAGGCTCAGGTCGCCCTTGTCCGTGCGGCGCA10.8264462809917356No Hit
ACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTAAACTGCGTTTTTA10.8264462809917356No Hit
GGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATT10.8264462809917356No Hit
ATCTGGAAGGCTGAGAATCAGGTGACTGCTTAGAGAGGCCTTGATCGTTC10.8264462809917356No Hit
GCCCAGGGAAGGGAGGTCTCCGGCAGGGGTGGGGAGTGACAGGCCAGGGC10.8264462809917356No Hit
TCTGTAAGCCTTGCTTTTCCTCCTGTAGGCTGGCAGAGGACAGTGGAGCA10.8264462809917356No Hit
GGGCCGCCCCCCCCTCCACGCGCCCCGCGCGCGCCGGGACCGGGGTCCGG10.8264462809917356No Hit
GTGGTTCACGCCTGTAATCCCAGCACTTTGGGAGGCGTAGGTAGGCAGAT10.8264462809917356No Hit
GTCTGGTGCCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCG10.8264462809917356No Hit
GGTCGCAGCCGGCCAGCGCCTGGATCGAATCGACAGCCTTCACGCGGGCG10.8264462809917356No Hit
TCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTG10.8264462809917356No Hit
GTATTTGGTTGTGATACTGCTTTCCAGAGCCAAAGAAAATAAGACTGCTC10.8264462809917356No Hit
CCCACGGCGCGACGCTGTTCCTCCTTCTTCACTCGACCGATCAGCGTCTA10.8264462809917356No Hit
GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAAAAAATTC10.8264462809917356No Hit
AAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTG10.8264462809917356No Hit
GTAATTTTAATAGCTTAAGATTTTAAGAGAAAATATGAAGACTTAGAAGA10.8264462809917356No Hit
GGTCTTCGGGTGTCGCGAGGAAGGGCCCTGCTCCTTTCGTTCCCTGCACC10.8264462809917356No Hit
GCTTCCCAGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTT10.8264462809917356Clontech Universal Primer Mix Long (96% over 26bp)
GAGTACATGGGATTTGTGAAGAGACGAAGACTGAGCGGTTGTGGCCGCGT10.8264462809917356No Hit
GAGCACTTTGGGAGGCTGAGGTGGGCAGATCACCTGAGGTCAGGAGTTCG10.8264462809917356No Hit
CACCTAGCAGGAGCTCAAGAAGTGTTCGCTGATGATGGTGAAGAACGTTA10.8264462809917356No Hit
GTTCCCGACAAGTCTTCCTTATTTTCAAACTCCATGCGGATGGGATCATA10.8264462809917356No Hit
ACAAAACAGGAAATAGTAGGGCAAAGGAAGGTGAGCTCCTAAAGGGGCCC10.8264462809917356No Hit
TAGTAAGGATGGTGAAACCCCATCTTTACTAAAAATGCAAAAATTAGCTG10.8264462809917356No Hit
GTTCTCCAGGCCCTCGATGACCTCGATGCCATTGTGGCTAAGGTACAGCT10.8264462809917356No Hit
GTGAGACTCTGTCTCAAAAAAAGAAAAAGAAAGAAATAATCCACTAGATC10.8264462809917356No Hit
GAATATAGGCAGATGTACAGAACTGAAATTCGAATGGCGAGGATGGCAAG10.8264462809917356No Hit
GAGCAGGAGCAGGCAGGTTGGCCTCCGTCAGCAAAGCTGCATCTTCCCAG10.8264462809917356No Hit
CCTTCCTTCTTCTCTGGTGGCTTCTCATAAGCCTTTTCTGAAGGTGTTAC10.8264462809917356No Hit
GCTGATGGCCGCCCTCGTGGTGGCGCCGTTCGGTGTGGCCGAGGCCGGAT10.8264462809917356No Hit
TTCCTGTTCCCAGCTGCATCAGAGAGCCTGTCTGGGGCCAAGGTTGCCAG10.8264462809917356No Hit
CATTTGTAGCGAACACTTTGACTCCAAAGAGAAGGAGGAAGACAAAGACA10.8264462809917356No Hit
CCTGGCTAGTATTTTTTTGTTTTATGTTTTTTGTTTCTAATTTTTAGTAG10.8264462809917356No Hit
GTGTGAAACAACTAATTGTCGGTGTTAACAAAATGGATTCCACTGAGCCA10.8264462809917356No Hit
TCCTCCACCCTCCAAGTCCGCGCTGGAAAATCACCCGCTGCGGGCTCCCG10.8264462809917356No Hit
TACCTATGTTGGTGCCTTGTTTAATGGTCTGACACTACTGATTTTGGCTC10.8264462809917356No Hit
GTTCATAGGGTCCTCCTCCTCCTGGCAGTTCAGGTCCTCTTTGCTGGTGA10.8264462809917356No Hit
CGATTACCGCGCCATGCCCGAGGGTTTTGAAGGCATCGAGATCCGCGCCG10.8264462809917356No Hit
AGTTTCAGCTTTGCAACCATACTCCCCCCGGAACCCAAAGACTTTGGTTT10.8264462809917356No Hit
CTATAAAGATTTTCATACCTTTTCTAATAGGAGCTTGGATCTTTTTCAAG10.8264462809917356No Hit
CTACAGTAGGAATAGACTTTCGGGAAAAACGTGTGGTTTATAATGCACAA10.8264462809917356No Hit
TAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAG10.8264462809917356No Hit
ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATCTGTCTC10.8264462809917356Clontech Universal Primer Mix Long (96% over 26bp)
GGTGAGAATAGTGTTAATGTCATTAAGGAGAGAAGGAAGAGAAGTAAGCC10.8264462809917356No Hit
GAGCTGGTAAAACAATTTCAGTCTCAGACCCGTCTGTTTTCCAGGGTCCT10.8264462809917356No Hit
GTCCAGAGGCTGCAGCTGTTGGTCCCCTTCTAGAACATAACTAAGATGAC10.8264462809917356No Hit
CAACAGGGAAACATGGGCTATACTCAGAGAAGACCCTCTGCATTGGCCAA10.8264462809917356No Hit
ATTATATGCTAAACAAGGGGTGGACTATTCAGGAGTTTTCTAGGAAAGGG10.8264462809917356No Hit
GCGTGGGGCTGTAGGGATTCGCCATTCCCCACGGAATCCTGAGCCTTCGG10.8264462809917356No Hit
ACTTCCATGCCCATAGCTTAACTTCTAAAAGGTAACCATTCCATACTGTT10.8264462809917356No Hit
TCTCCTCCCTGTCTCTGCTCTCAGACATGGAGTTGATTATGCTTTTTAAA10.8264462809917356No Hit
GCTTTTATTTGCTTGCCCTAAGTCCAAGATTATTTCCTTCTTTCCATATT10.8264462809917356No Hit
TTTATGGATAGTGTTTTTGGTGTTATATGTAAAAATTCTTTGCCTAACTC10.8264462809917356No Hit
GTGGTGTGCTCTGGCCAGGCCTGGATCACTTGTCCATCCTGAGTGGGAGT10.8264462809917356No Hit
GACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTC10.8264462809917356No Hit
GGGCCGCCCCCCCCTCCACGCGCCCCGCGCGCGCCGGGCCCGGGGTGCGG10.8264462809917356No Hit
GTAGATGCCGTCGGAAATGGTGAAGGGAGACTCGAAGTACTCTGAGGCTT10.8264462809917356No Hit
TAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACGTCGCTTTTTTATCC10.8264462809917356No Hit
ATCAGATCAAAACCAACCCGGTCAGCCCCTCTCCGGCCCCGGCCGGGGGG10.8264462809917356No Hit
GGAAGCAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATT10.8264462809917356Clontech Universal Primer Mix Long (95% over 21bp)
CTCTTAAAGATATTGTGGGGCTTGTCCTTTAAAACAAAGACGATATCAGC10.8264462809917356No Hit
CAGCATAATTCTTCAGGTGCATCTCCTAGGAGAGTCCGTCATGATTCACC10.8264462809917356No Hit
TTTATACCTGAATATGGCTCATAACACCCCTTGTTTGCCTGGCGGCAGTA10.8264462809917356No Hit
TAGTAATGGCAATAACTCATTTTTTAAATGCTTCCTATGTGCTAAGCACT10.8264462809917356No Hit
ATGTTGGACTTCCCAATCTCTAGAACTGTGAGAACTAAATTTCTGTTGTT10.8264462809917356No Hit
CTCTTACCTCGCCCTGGCCACCGAAACCGTGGACATGTTCCACATCCTCA10.8264462809917356No Hit

[WARN]Adapter Content

Adapter graph