FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003658361

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003658361
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length140
%GC60

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGGAAGCCGATCAGGAAATAGATGTGCACGAACAGCCATAACAGCCAGG313.043478260869565No Hit
GGCGATCTTCTTGCGATCCTTGTCAGCAATGCCGATGTTGATCTGGGCTG28.695652173913043No Hit
CTACCCCAACATCCGCATGGTGACGTTCGGCCATCTTGGCGATGGCAATC28.695652173913043No Hit
ATCCTCAAGCGCCGAGCAAAAAGCTCGGCACGCGGAGTAAAAAGCTCGAC28.695652173913043No Hit
GTGACAGTAACCGTGCGCAGCGGCAGGGAAGACCACCACAGCCGTCGAGG14.3478260869565215No Hit
GGCCCCCTCGCATTGGCCGGCGCACGCCTAAGCGGCGAGGCCGCAAGAGT14.3478260869565215No Hit
GAACTGGGGTGTGGCGTGGCATCGCCTGGGCGCGTTCTGCAATATTTACT14.3478260869565215No Hit
CAAGCGCGGTCTGAAAAACCGTCATATCCAGATTATCGCACTGGGCGGTG14.3478260869565215No Hit
CAAAATATGCTTTCGAATTGGGGTCAGTTGATGGATCCATGGAGAGTTGC14.3478260869565215No Hit
CATTAGGGGGCGACAACCGTGACGATGCACCTTGATACCCGGGGTCACAA14.3478260869565215No Hit
CCAGTGTAGTGCGATAGCGATCCCAGCTACCGGCGCTGAGATCGAGACGG14.3478260869565215No Hit
ATTATTGGCACTATTGGTGTCCTGAACGATGTCACAATTAGCCAAGCAGC14.3478260869565215No Hit
GTTCGGCTATGCGCTGACGTTGGTCCGCGCTTCGGCCGAGCGCGCCAAGC14.3478260869565215No Hit
CGGCTGGCCGCATCTGGTGGCGCTCGGCGTTGGCGCAATCGTCGGCACCG14.3478260869565215No Hit
CAAGCGCGGTCTGAAAAACCGTCATATCCAGCTTATCGCACTGGGCGGTG14.3478260869565215No Hit
GAGAATTGCGAATCGGTTGCTTCGACGAGTTCGAGATTACGCAGATGTTC14.3478260869565215No Hit
GTATCACCATACGTGGGAAGGACACAGCTGGAGTAATGAAATGCCCAGTC14.3478260869565215No Hit
TTTTACCAGGATCTGCTCGCCTCCCGCGGCCTGCGCTGGTTTGCGGGAAT14.3478260869565215No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)