FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003658362

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003658362
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23
Sequences flagged as poor quality0
Sequence length140
%GC61

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCCTAAGCAGGGCGAGCCGACGCCGGTGCCCGGCGTGAGCCCGGCGGCC313.043478260869565No Hit
GTGTAGGCGCCAGGAACGCGCAGGGTCGCAAGGAGAAAAGGCATGGCAAT28.695652173913043No Hit
GCCGGAGGCGAAGCCGGCGAAGTCACCCCAGTACTTGTAGGCAAAATGGC28.695652173913043No Hit
TGTTGTGGCTGCTGGCCGCGACAGTCCTCTTCGCAGTGGCGAACTACACG28.695652173913043No Hit
ATGCACGGCATGATCGACATGGTGCGCAACGGTGAATTTCCTGCGGGCTC28.695652173913043No Hit
TTCTTGATGAGCTTCGTTGTCGGAGCTGCGCGTGAGTACCCCGATCTCTT14.3478260869565215No Hit
GTTTAATACTTCCCACATACCTCGTGATGATTGCTGTATGAGGAGAAGGA14.3478260869565215No Hit
CTCACACACTTCCTCAATAGTATTCGGTTCTTCACCGACTGCTACAGCGA14.3478260869565215No Hit
GCCCGTCTCGATCTCAGCGCCGGTAGCTGGGATCGCTATCGCACTACACT14.3478260869565215No Hit
GCGCCGCCAGCGCTTCGGGCGATTCCTTGCCCAGCAGGAGCTTGGTCTGG14.3478260869565215No Hit
GTAGGGGGCACTGTCCTGGGCAACGTCACGCAGCCAAGTAATAATGAGCT14.3478260869565215No Hit
GCGATGATGAGTCCACTGATGCAACCGTCACCACTTCTACAACGGTAACC14.3478260869565215No Hit
TATCAGCATAGAGACGAACTTCTTCATGATTCACTCCAAAGGAAGGATGA14.3478260869565215No Hit
CCCAATCGTCGTTGATCCAGGAAGTACGTTAGACGTCCAACATTTTGAAG14.3478260869565215No Hit
GCCCAATACCCCAATAGGGTATTTAGCAGGGAGACCCTGTTGCGTGAGGT14.3478260869565215No Hit
GATCAGGGCCGCGCGCTCGATGACGTCGAAGGCCTGGGTCATCCCGGCCA14.3478260869565215No Hit
TCCCCGCCCCGACCCCGATCAGCGTCAGGATGCCGGTGCCGACGATTGCG14.3478260869565215No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)