FastQCFastQC Report
Tue 10 May 2022
EGAF00003658472

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003658472
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences78362
Sequences flagged as poor quality0
Sequence length140
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACC1180.15058319083229116No Hit
GTGTAGACTGTAGCGCTAGAGAAGCAATTTCTGACCCCTCTTTCTTTCTC830.10591868507695056No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT800.10209029886934995No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)