FastQCFastQC Report
Thu 1 Sep 2022
EGAF00003658483

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003658483
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56
Sequences flagged as poor quality0
Sequence length140
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGACACATGATGGCCAGCGCCCGCTGCCGCTGAGCCGCCATCGATTGCAA23.571428571428571No Hit
GCCACACACTTCTGGGAGCCCTCTATGAGGTGGTTCACGGGGATGCCCAG23.571428571428571No Hit
CTTCTGGGAGCCCTCTATGAGGTGGTTCACGGGGATGCCCAGGCTGCTCA23.571428571428571No Hit
CCTCTGAGCAAGGTCCCTCTGCAGCAGAACTTCCAGGACAACCAATTCCA23.571428571428571No Hit
GCCCCCAGCAGGGCCTTCAGGGCCTTCACGGCCCCCACGGCCTGGGGACC23.571428571428571No Hit
CTCAGGAAGCACAGAGTCCAACAGGACCATGAATTCTTCTGGAGAGAGCA23.571428571428571No Hit
GGCTGTGAGGCCCTCAGGGCAGGGATACAAAGCGGGGAGAGGGTACACCT11.7857142857142856No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTAAACAGGC11.7857142857142856No Hit
CCCCTGGTCACGGCTACTCATGGAAGCAGGACCAGTAAGGGACCTTCGAT11.7857142857142856No Hit
AGCTTTCAGCGTGTCATCGAAACCCTCCTCATGGACACACCCTCCAGTTA11.7857142857142856No Hit
GTCTCACTCTATCACCCAGGCTGGAGTGCAGTGGTGTGATCTTGACAAAA11.7857142857142856No Hit
CTATGAGGTGGTTCACGGGGATGCCCAGGCTGCTCAGCAGGAGCTTCAGC11.7857142857142856No Hit
GGCTTGGCCGAGCCCCCGCGCCATGAAGCTCGCCGCCCTCCTGGGGCTCT11.7857142857142856No Hit
CCACAAATAGGACCACTCAGTTGCCCAAACCAAGATCTACGACACCACCT11.7857142857142856No Hit
GTGTACCCTCTCCCCGCTTTGTATCCCTGCCCTGAGGGCCTCACAGCCAG11.7857142857142856No Hit
TTCTGGATCTGCTCCACTTGTTCCACCAGCTGTCGCACTCGTAGCTGCAA11.7857142857142856No Hit
CTATCTTCCAGCCTGTCTTCTCTAGGAACGCTGTTGACATGCCAGGGCTC11.7857142857142856No Hit
GTGTTGATGAGCGGCTCGCGCTCGATGATGTAGAAGGTGCGCGCGTCATC11.7857142857142856No Hit
CATGCTGAGTGTCAGCTAAGGAAAGGAAGCACACCTAAAAACAGCCCTGG11.7857142857142856No Hit
GTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGTTTAAACCACCCC11.7857142857142856No Hit
CTTGTAGAGAGATCCCTGGCCCAGGACAGGAGATGCCAAATCTAATTTAT11.7857142857142856No Hit
CCTTCATTCCCCAAGGGCTCGCTCAGCCAGATGCAATCAATGCCCCAGTC11.7857142857142856No Hit
TCCGAGTGGTGAGCACCAACTACAACCAGCATGCTATGGTGTTCTTCAAG11.7857142857142856No Hit
ACAAAAAAAAAAAAAAAAAAAAAAAAAATTACTCTGCGTTGATATGTCTC11.7857142857142856No Hit
GGTGTAGATGCTCCAGTCTCGGCTCAGCCAAACACTGTCAGGGCCCCCAG11.7857142857142856No Hit
GTACATGGGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATGC11.7857142857142856No Hit
GGTATCAACGCAGAGTACATGGGGCAGCCCGGTTCCCGGGAGGATGAAGT11.7857142857142856No Hit
TCCTTTGGTCGCTCGCTCCTCTCCTACTTGGATAACTGTGGTAATTCTAG11.7857142857142856No Hit
CCCATTGTGTACCCTCTCCCCGCTTTGTATCCCTGCCCTGAGGGCCTCAC11.7857142857142856No Hit
ATTGGAATGAGTCCACTTTAAATCCTTTAACGAGGATCCATTGGAGGGCA11.7857142857142856No Hit
CCTCATGGGCTACACCTTGACCTAACGTCTTTACGTGGGTACTTGCGCTT11.7857142857142856No Hit
ACAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAATAAAAAAA11.7857142857142856No Hit
CCCCACGGCCTGGGGACCCAGCTCAGCCACACACTTCTGGGAGCCCTCTA11.7857142857142856No Hit
CACGGGGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCCGC11.7857142857142856No Hit
GGATACTAGCCCACCAGACTCAGAGACGGAACCAGAGACAGGCCCTGTCT11.7857142857142856No Hit
TAATTACACAGTGAGCTTTGGGCTATTTTTTCCATGAGCTTAATGATGCT11.7857142857142856No Hit
GGCCAACCCCCTCGGCACCCTCAACCCGCTGAAGCTCCTGCTGAGCAGCC11.7857142857142856No Hit
CTGGATATTCTCTCTGGCATCTCTGATCGCTTCTGCAGCCCAGACACCCC11.7857142857142856No Hit
GGCCAAAGGAACAACTCCATGTTTTCTAAAAGGCCTAGAGAACATATATC11.7857142857142856No Hit
GGAGTGGGGAGGGCTGGGGTGAGGAAGGGAGCCGTGGGCTGGTGTGTGGA11.7857142857142856No Hit
GCTGCAGGAGGTCTGCATACATGCCATTGAAGGAAGCCTCGATCACGGGA11.7857142857142856No Hit
CCCCTGACCTTCACTGGCCTATACTCCAGATTTTTCAGTTCCATTGGGTC11.7857142857142856No Hit
CGCCCCAGCTGCTGACGCTGGTGCCCAGGGGCTGGGATGCCCACACCCTG11.7857142857142856No Hit
CTAGTATAAGAGATCAGGTTCGTCCTTTAGTGTTGTGTATGGTTATCATT11.7857142857142856No Hit
CTCAGGAGATCTGGCTGTGAGGCCCTCAGGGCAGGGATACAAAGCGGGGA11.7857142857142856No Hit
GCTCAGCCTCCCGAGTAACTGAGACTCCAGGCATGTGCCACTACGCTTAG11.7857142857142856No Hit
ATCCAGGAGAAAGTGGCCAAGGGCTAAGAGAGAAGAGATTGCATTTAAGA11.7857142857142856No Hit
ATTAAGATCTGGGGTCCCAGTGTCATTGGTGAAGGCCTTGGGATTCGAGG11.7857142857142856No Hit
CCCTCAACCCGCTGAAGCTCCTGCTGAGCAGCCTGGGCATCCCCGTGAAC11.7857142857142856No Hit
AATCACCACCCAACAATGACTAATCAAACTAACCTCAAAACAAATGATAA11.7857142857142856No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)