FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003658621

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003658621
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19
Sequences flagged as poor quality0
Sequence length140
%GC66

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CACGTCGGCCATGCCCAGCCGGTCGCGGTCGGCGTCCAGCAGCTTGCCGT210.526315789473683No Hit
GGCGCCCACGGCGCGCACCGCGTCGCGCGCGGCCTCGGCGTCGTGGGCGA210.526315789473683No Hit
TTCTTCACCTGCTCGCCCTCTGCGATGCGGCGCGCGGCGATCTTGTGGCC15.263157894736842No Hit
ATCCTCACCAACCTCCCTATGCCCAGCCGCCGGCGCCCACCCGGAAGAAG15.263157894736842No Hit
AGCAAATGCTTCTGCTGCTGACTTCCCTTGAATGAGATCGTCAACGATAC15.263157894736842No Hit
CGACACCGACGGTGACGCCGAAGGCGGTGACGAGCAGAGCCCGCCGGAGG15.263157894736842No Hit
CTTTTCAGAGGTCGGGATTGGCATCGAATGGTCCAGCACAACAAGCTCTC15.263157894736842No Hit
GAACAGCCCCAGCGCCAGCAGGAACAACAGCCACGAGTTCCACACCACCA15.263157894736842No Hit
GCATATAACGAGCTGAAAAAACTGATGCCAAACGTGGCAGCCTTTAACTC15.263157894736842No Hit
TCGTCGGGATGGTGCTGCAGTGGAGTACCCCCGGACCCCCGCGTTGACAC15.263157894736842No Hit
GCCTGGCGCCGTCGGACCTGGAGGAGTTCCGTTCCCGGCTGCACGGACTG15.263157894736842No Hit
TGCCCGACGTCCCTACCTTCGCGGGGGGGGGGGTGGGGGGGTTAATTGGC15.263157894736842No Hit
GCTGGAGGCCTATAACCGGGAGATTCAAAAGATGCAGGAAGGCGGGAAGC15.263157894736842No Hit
TCGGAGAAGTGCCGGTCGCCGTGCAGTTCATCGAACTCGGTGAAGATGTG15.263157894736842No Hit
TGCCCGACGTCCCTACCTTCGCGGTGGGGGGGTGGGGGCGTTAAAACGGC15.263157894736842No Hit
TGCCCGACGTCCCTACCTTCGCGGGGGGGGGGGGGGGGGGTGAACAGGGC15.263157894736842No Hit
GTATCCAGCTTGAACATCCGACGCAGGAAGTAAATGCGTGGATTGCCGGG15.263157894736842No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)