FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003658622

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003658622
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19
Sequences flagged as poor quality0
Sequence length140
%GC65

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GACCGGCTCCGCTACCAGCGGGCTACAGAGCGGGCAGGTTGATGCGCTGA315.789473684210526No Hit
CGTGTTCACGGACCTGGCCGAGGCGGAGGCCCACGCGGTGGCGATGGGCC210.526315789473683No Hit
GAGGGCTACCGCACCTGGGCGGCCGAATGGGTGGAAGGCCGTCTTCTGCA210.526315789473683No Hit
GGTCCATCCAGAAAATGCCGCCTTCTTTCGGCCATACCACGTCAATTGGC15.263157894736842No Hit
GGCCCGGACTACGAGAAATACGTCAACACGGTCTATCAAAAAGAGACCGT15.263157894736842No Hit
GTGTTGGAAAGTTCCTGACCGGCGGTGATGCCCAAAAGAGCTTTCTTGGC15.263157894736842No Hit
GTGGTGTAGAGCTGTTCGTCGACCTGCCAGGCGATGATCCCGCCGGCCAC15.263157894736842No Hit
GTATCCCTGGCCCAGATCGCGGTCGAACCGATCGCCGGGCCGGTGACCTC15.263157894736842No Hit
TCATGCGAGTTGTCATCGCTGCGTCTGTCATCGCCCTGTGCAACGCCTCA15.263157894736842No Hit
GGATCTGATCGGCTAACTTGGCGACACGCGGATTCGGTGTGTTCATGATC15.263157894736842No Hit
CCGCCATATCCTGATGAGCTACACCGGTCTGGATCGACTGACTGTGGTGC15.263157894736842No Hit
CCAGTTGGCAGATCGCCCAGTTGGCACGCCATCCGCGCCGCCCGTATACC15.263157894736842No Hit
GGATGATGCTCCGCATCCGCTGGGCGGGGGTCATGTTGAGGGCGATCCCC15.263157894736842No Hit
CTGCGCATGAACCAGGAAGAGATGCGCAAGGCGGCCGAGCTGACCAGCGG15.263157894736842No Hit
GACCATTAGGCCCAGAAGCACCATCGTTTGGACGAACTAGCGTACTCAAA15.263157894736842No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)