FastQCFastQC Report
Tue 10 May 2022
EGAF00003658795

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003658795
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5794
Sequences flagged as poor quality0
Sequence length140
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACATGGGACTGCGATAGGAATCATGTCTGGTCGCGGCAAAGGCGGAAA200.3451846738004833No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT130.22437003797031413No Hit
GTACATGGGAGTCCGAGCGCCGCGCTGGGGAGAGCGGGTGTTTGAAGGCT120.20711080428028997No Hit
TCTCAGGAGACCGCGTATTCTTAGATTCAGCCGCCGAAGCCATACAGAGT110.18985157059026578No Hit
ATCGTAAGGTGCTCCGGGATAACATCCAGGGCATTACAAAACCGGCTATT90.15533310321021745No Hit
GTATCAACGCAGAGTACATGGGAGTCCGAGCGCCGCGCTGGGGAGAGCGG90.15533310321021745No Hit
TTTCTGTACTTCGCCTACGGTAGCAACCGGCTGACGAGAGTATCCACCTC70.12081463583016915No Hit
TATCAACGCAGAGTACATGGGACTGCGATAGGAATCATGTCTGGTCGCGG60.10355540214014498No Hit
CCCTTTTCTTGATAAATTTGAGGGCCCGTTTGTCCTTGGAGACCTTCAGT60.10355540214014498No Hit
GTACATGGGAATGAGAGCCCCGCTGCTACCGCCGGCGCCGGTGGTGCTGT60.10355540214014498No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT60.10355540214014498No Hit
CTACAGGAGGAAACGCGAGCGTGGTGGGACTGGCTCCAGGCACACAGGCG60.10355540214014498No Hit
TCCTTAGCCTCCCAAGTAGCAGGGACTATAGGCGCCCGCCACCACGCCCG60.10355540214014498No Hit
TTTCTCACCACTGCAAATTTCCCCCTGCCCAGCTCCCGGCCCGGGCACAG60.10355540214014498No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG60.10355540214014498No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT60.10355540214014498No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)