FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003658811

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003658811
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length140
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCATACATCCCTCACCGCCACTGCTTGATCACCCACATCGGTGGCGCAA211.76470588235294No Hit
TGCCAAGGTAGTCGCTGAGCGTGCCGGAGAATATCTTGACGATGAGTGCG211.76470588235294No Hit
GTAATCTTGGCTAGGATACGGCAATATTGGACACGGTTGAACAGCTAGAT15.88235294117647No Hit
GAGCCGGCTTTTTGCCAACGAAATGCTGCGCGGCGCGCCCCACATCATCG15.88235294117647No Hit
GCCGTGCACCTTGGCGGTCTGGCCGCTGAACTGCTCCTGGGTTTCGTCAC15.88235294117647No Hit
GGGCGCAGACTGCGGATCGTGTCCAGCGCCACCAACACGACGGTGTTGTT15.88235294117647No Hit
TTTCGGGCTGATAGCCCGTGTTCGCGGGGTCGGCCCGATACATCGGCCAG15.88235294117647No Hit
CCATAATATATTGAACGGCATCGTTTAATATTGAAAGCTCCGGCGGATAG15.88235294117647No Hit
TTGTTCACCGGTGTGCGCGGCGTCATCAGCCACCACCTCCGAGCACCTGG15.88235294117647No Hit
CGCCGCGGCAGCCTCCCCCAGCGCCTCGGCGTATTCGCGCAGCGCCGCGC15.88235294117647No Hit
TCGCGGTCGCGTACTGCACCTGGGTCCACTCGGCGCAGTTCGGCGCCCAG15.88235294117647No Hit
ACCAACACACCAGTCGATTTACAACAACCGGAACGCCGAGAGACTTTTTC15.88235294117647No Hit
GGGCGGCGCGGCGCTCGGCGTGGTCGGGCAGCACCGACGCCACCCAGGCC15.88235294117647No Hit
CGGGCGTGTCGTTCGGTAACCGCCCGGCCTTGCTCCGGTGACCGCCCGGC15.88235294117647No Hit
CCACTGGCATATCACGCAGACCGAAATTGGCCATGCAGAGGTTATCACTG15.88235294117647No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)