FastQCFastQC Report
Wed 31 Aug 2022
EGAF00003658812

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003658812
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17
Sequences flagged as poor quality0
Sequence length140
%GC65

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGCGGGGATGGCACCTTCGAACGGCTGCCGGGCGGCGCGCATATTGCGC211.76470588235294No Hit
ATGTTCAGCTTTGCGCGCGATGCCGCCAGTGGAGCCAAGCTCAACGGCCT211.76470588235294No Hit
CCCCGCGCGCGCGCCGCACCCGCGGCGGCGATCCCGCGGCGGCGTCTCCG15.88235294117647No Hit
GTTCAATCTCACGTTCTGGCGCGACCCGGCCGACGCCGAGGAGCCGAACG15.88235294117647No Hit
TTACAACCCATAGGGCAGTCGTCCTTCACGCGGGATGGCTGGTTCAGGCT15.88235294117647No Hit
GCCTCACGGGAGTCGACGACCCGGGAGTCCGGGTGACGGCAGTACGGGCA15.88235294117647No Hit
GGTGACGGCGTACTGGCAGCAGCTGATCGATGAGAATCAGGATCGCCTGG15.88235294117647No Hit
ACTGGAGATGGGCAACAGCCGTGGCAAGTCAAGGCTGGCGGGGCTATCGG15.88235294117647No Hit
CGCGTGGCGCGCGCCTTCGGCGACCGCGAGGCGCTGGTCGACCGCGCGGC15.88235294117647No Hit
GGCTGCTGGTGAGAGATCTTTCTTATGGACCGGAGTGCGGACACGAGCCG15.88235294117647No Hit
GGCCAAGCACTTGCTGCGTGAACTTATTCGGACCGCATCGGCGCGGTCCT15.88235294117647No Hit
GCTTCGCCCCTTTGAAATACCTTGCTTCTTTTCGTACAACCCTGAAAGCC15.88235294117647No Hit
AGCCAAGCGCTTCGATCTGCCGGTGACCATCGCGCCGGACGGTGCGGTGA15.88235294117647No Hit
AAGCGGCCTTCGCCGCCGCGGCCCTTGCCGAGGACGGCGCGGACCTGGAC15.88235294117647No Hit
CGCTGGGGCAGCGCCAGCAGCCGCGGCACCATCAGCCTCAACTGGCGCCT15.88235294117647No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)