FastQCFastQC Report
Tue 10 May 2022
EGAF00003658825

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003658825
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences560148
Sequences flagged as poor quality0
Sequence length140
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTACATGGGTACCTGGTTGATCCTGCCAGTAGCATATGCTTGTCTCAAAG7900.14103415525896726No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA6190.11050650899405157No Hit
GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA5960.10640045130929682No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)