FastQCFastQC Report
Tue 10 May 2022
EGAF00003658864

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003658864
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences294270
Sequences flagged as poor quality0
Sequence length140
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCTAGTACTGTGCGCCAATTAGGTCGTCATTGCGCCAGCTCGTCAGCGC4320.14680395555102457No Hit
CCCTCAGGAAGCTAAGAAATACTATCTCGGCAATAGGATTGTAGCCCAGG3900.13253134876134162No Hit
GTACTAGGCATCGTCATCCAATGCGACGAGTCCTACACTATCTTGGATAT3800.12913310904951236No Hit
CACACACACACACACACACACACACACACACACACACACACACACACACA3160.107384374893805No Hit
GTATAAGGTGATCGCAGGTTGTGCAATCATTGCTCAAAAGGGTGTACACC3040.10330648723960989No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)