FastQCFastQC Report
Tue 10 May 2022
EGAF00003658982

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00003658982
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences449149
Sequences flagged as poor quality0
Sequence length140
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCCAGGGAAGAAGAGATGTTGTCCTGACACTTGTGGCATCAAATGCCTG5330.11866886044497482No Hit
GTACATGGGAGAGTCACTCCTGCCTTCACCATGAAGTCCAGCGGCCTCTT4730.10531026452246359No Hit
GTACAGTGAAACTGCGAATGGCTCATTAAATCAGTTATGGTTCCTTTGGT4710.10486497799171322No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)